Effector profile
| PlantPEAD ID: PlantPEAD18334 | Uniprot ID: A0A0P9R0Z0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 47877 | Pathogen type: Bacteria |
| Species: Pseudomonas amygdali | Strain: pv. dendropanacis strain ICMP9150 | Other name: |
| Gene name: | NCBI Gene ID: LJQG01000087 | |
| Entry name: A0A0P9R0Z0_PSEA0 | Protein name: UPF0234 protein ALO71_03009 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAGTCGCGGAAGTTGTTGAATTGCAGCGGCATGCCCGAATCATAGGCACGCAGCGCTGCGATCGCTTCTTGCAGGTCGTCGCGCTTCTTGCCGGTAACCCGCACTTGCTCGCCCTGAATGGCGGCCTGGACCTTGAGTTTGGCCTCTTTGATATGGGCGACGATTTTTTTCGCCAGTTCCTTGTCGATGCCTTCGCGCAGGGTGACTTCCTGCTTCATCAGTTTACCCGAAGCGTAGGCATCCTTGATCTCGAGGCATTTTGCGTCGATCTTGCGTTTGACCAGCGCCAGCTTGAGGATTTCGATCATGGCCTCCAGCTGAAAGTCTGCTTCTGCGGTCAGCGTGACAGTCAGTTCCTTGAACTCGAAAGTACCTTTGCCTTTGAGGTCGTAGCGACGGTCCAGCTCTTTGATGGCGTTGTCGACGGCATTCGTGACTTCGTGTTTATCCAATTCGGACACTACGTCGAACGAGGGCATGTATGTTCTCCAGATAAACGGCGTGCGCACGATTCGGGCACGCGTGACTTGACGGTTTGAAAGAACGCTCAT
Protein sequence:
MSVLSNRQVTRARIVRTPFIWRTYMPSFDVVSELDKHEVTNAVDNAIKELDRRYDLKGKGTFEFKELTVTLTAEADFQLEAMIEILKLALVKRKIDAKCLEIKDAYASGKLMKQEVTLREGIDKELAKKIVAHIKEAKLKVQAAIQGEQVRVTGKKRDDLQEAIAALRAYDSGMPLQFNNFRD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20900.3 | 183 | 9.21 | -0.355 | 35.16 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR007551,IPR035571,IPR035570,IPR036183
Pfam: PF04461
SMART:
KEGG:
PRINTS: