Effector profile
| PlantPEAD ID: PlantPEAD18337 | Uniprot ID: A0A3M5Q581 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. sesami strain ICMP 7459 | Other name: Pseudomonas amygdali pv. sesami |
| Gene name: | NCBI Gene ID: RBUZ01000349 | |
| Entry name: A0A3M5Q581_PSEAQ | Protein name: UPF0234 protein ALP04_00132 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGCGTTCTTTCAAACCGTCAAGTCACGCGTGCCCGAATCGTGCGCACGCCGTTTATCTGGAGAACATACATGCCCTCGTTCGACGTAGTGTCCGAATTGGATAAACACGAAGTCACGAATGCCGTCGACAATGCCATCAAAGAGCTGGACCGTCGCTATGACCTCAAAGGCAAAGGCACGTTCGAGTTCAAGGAACTGACTGTCACGCTGACCGCAGAAGCAGACTTTCAGCTGGAGGCCATGATCGAAATCCTCAAGCTGGCGCTGGTCAAACGCAAGATCGATGCAAAATGCCTCGAGATCAAGGATGCCTACGCTTCGGGCAAACTGATGAAGCAGGAAGTCACCCTGCGCGAAGGCATCGACAAGGAACCGGCGAAAAAAATCGTCGCTCATATCAAAGAAGCCAAGCTCAAGGTCCAGGCCGCCATTCAGGGCGAGCAGGTGCGGGTTACCGGCAAGAAACGCGACGACCTGCAAGAAGCGATCGCAGCGCTGCGTGCCTATGATTCGGGCATGCCGCTGCAATTCAACAACTTCCGCGACTAA
Protein sequence:
MSVLSNRQVTRARIVRTPFIWRTYMPSFDVVSELDKHEVTNAVDNAIKELDRRYDLKGKGTFEFKELTVTLTAEADFQLEAMIEILKLALVKRKIDAKCLEIKDAYASGKLMKQEVTLREGIDKEPAKKIVAHIKEAKLKVQAAIQGEQVRVTGKKRDDLQEAIAALRAYDSGMPLQFNNFRD
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20884.2 | 183 | 9.21 | -0.384 | 37.26 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR007551,IPR035571,IPR035570,IPR036183
Pfam: PF04461
SMART:
KEGG:
PRINTS: