Effector profile
PlantPEAD ID: PlantPEAD18420 Uniprot ID: A0A117ECK0 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 1930 Pathogen type: Bacteria
Species: Streptomyces scabiei Strain: S58 Other name:
Gene name: NCBI Gene ID: BCMM01000004
Entry name: A0A117ECK0_STRSC Protein name: UPF0234 protein SsS58_01404
DOI:
Gene/Protein information
Gene sequence:
ATGGCCGACTCCAGTTTCGACATCGTCTCGAAGGTCGAGCGGCAGGAGGTCGACAACGCCCTCAACCAGGCCGCCAAGGAGATCTCGCAGCGCTACGACTTCAAGGGCGTCGGCGCCTCGATCTCGTGGTCCGGCGAGAAGATCCTGATGGAGGCGAACTCCGAGGACCGGGTCAAGGCCATCCTCGACGTCTTCCAGTCCAAGCTGATCAAGCGCGGGATCTCCCTGAAGTCGCTGGACGCGGGTGAGCCCCAGCTGTCCGGCAAGGAGTACAAGCTCTTCGCGTCGATCGAGGAGGGCATCTCCCAGGAGAACGCCAAGAAGGTGGCGAAGATCATTCGCGACGAGGGCCCCAAGGGCGTCAAGGCCCAGGTCCAGGGCGACGAGCTGCGCGTCAGCTCCAAGAGCCGGGACGACCTGCAGGCCGTGATCAGCCTCCTCAAGGGCAAGGACTTCGACTTCGCGGTGCAGTTCGTCAACTACCGGTGA
Protein sequence:
MADSSFDIVSKVERQEVDNALNQAAKEISQRYDFKGVGASISWSGEKILMEANSEDRVKAILDVFQSKLIKRGISLKSLDAGEPQLSGKEYKLFASIEEGISQENAKKVAKIIRDEGPKGVKAQVQGDELRVSSKSRDDLQAVISLLKGKDFDFAVQFVNYR
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
17958.4 162 6.4 -0.455 26.44
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.