Effector profile
PlantPEAD ID: PlantPEAD19053 Uniprot ID: A0A0Q0E1A9 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. viburni strain ICMP3963 Other name:
Gene name: NCBI Gene ID: LJRR01000053
Entry name: A0A0Q0E1A9_9PSED Protein name: Type III effector HopD1
DOI:
Gene/Protein information
Gene sequence:
ATGAATCCTCTACGATCTATTCAACACAACATTACAACTCCCCCAATCAGTGGCGGTCAGCCATTAGACGCCGTGGGCCCTCAGGCCCAGCAATCCCATCCTAAAAGGATTTCACCTTCTCAATTGAGCCAAAGCGCTCACCAGGCTCTAGAACGCCTTTCAGCTAATGCCGAACACCAACGCCTTGCATCACTTGTACGCAACGCTCTGCAGGATGGCACATTTCAATTTCAATCCAGTAACCACACGCAAGTAACCTATAAAGCGTCAATCTGTCTGCCAGCTGACACCGATACCGTGAGAACCGACCACTTGATTAATAACGAGCTGACGGTTCAGGCCCAATTAAATGATCAATCGGAGTACGACATCGTCAGCGCACATTTGCATGGCTCTTCGAAAGCCATATCCTTCGACGTACCCAGCCCCCCGCCCGCACATGGTTCAGCATCTTCTGTCTTGAGTGAACGGACCCATCTAGGTATGAGTCGCGTTCTCTCACAAGATGCAGTAGACAGCAGTAGCCTGGAAACTCCGTTACTGAGCTCGCCAGACCATTCTCGTCCGCCATCACAGCCAAAGCCCGTGCATATCGGGTCGGTCCGCAGGGAATCTGGTAACCTTGTTTCCGATAACCCGGTAGTGCAGGCCCTGCTATCGTTTGCGCAGGCCGACCAGGCATTTCCACCACAGGCCGCGAGCATTGCCGGGGTCCAGCTGGAAATGCGGCCACGTCGGGATATTGAGAAAGCACTTGAGGAATTCAAAGGCGCCTTCACGGTGGAGAAGGCGCAACTGATGTCCGGTGCCAACTCGTCGGAGCGTGTAGATGAGGATGTCAACGCAGACATCCATATCCCCTTATTGCTCAAGGCCATCGAGCGGGGGGCTGCGGCATTTGGTCCAAACGCATCAATCGGTCAGAATAGCGCGAAAGCGTTTCTCGCCTCATGTGCTCCCAAGATCACGTCCAATGACGATGTCCTCTCCGAGTTCATCAACCAGAAACTCAAGGGGGATGACGATCTTCAGGTTCGCCTGGGCGCACAGGAATTGTTGCATGTAGCCACCAAGAAGGAATTCCAGCTCGGCGGTCTAGCCGGCAGCATCGGGGTCAGCAGCATACTCGGCTCGGCATGGGAGCTTGGCGCTTCTGAGCTGTTGAAAAATGCCATCTTCGGCAAAAATTTCTCACCGAGCCAATATGCCCTGCAATTGGCTGGAATCGATTCAGTGCCTCCTTTGATTATCGAGTCCATGGACACCATGTGCGTACTTGCCATCATCAAGGGCATGAAAGGTGAGGAGTGGTCCATGAGCGATCTACTTCCCAAGGCGTTGAAGGCCGGTGCCATTTCCTCGGTGGTGTCATTCCCCAATAATGTTTTGCAGTATGCAGGTTTCAAATCCAGAGTCGGCGATCTTGCGGCAAACTCAGTGACAACTGAAGCGGCCATCTTTGGCGCCGCCTCCGGTATTCCACCCGAGGTCAAGGAAAGTGAAGAGCTGATGCGTGCTGGCTTATTCCAGAGCATGAAGGACGGCGTGATGGCTCATCCAGGCGAGGGGGTGGACACCAAAAAGACGATTGAGCGGATGACGCGCCATGCGCTGGATATCGCTCCGGGCGAAAGCACCGCTGTCAAGTCCATGGGGCTGGCATCGATTGTCGGGATGATTCCACTGATTGCCAGCAACAAGGCAACCGGGCTGCTGTCGGAACAGGTACTGCGTATTTTCCGGAGCGCCGTCTTCAATCCAATCGAAGCCATCGCTCTGAACGCGTTGGCGCTTGGCGGGCGTGTCAACGTTCCCGGGCTATTTGATTCCGACAATGCCAAGCATGCACGCGTGGCACAAACCATCCTTGCGCGGGCCAGCCAGCACATGGAAGCTGGAGACCGTGACATTTCCGCAGAGGAGCTACATCAAATGCTGGCTCCCCGGAGCGAGTTCCTGCGCCATGTAGGATCTGCGATTGTCAACGGCATGAATGCCAGCTTTGAGGCAATTCCCGCCCTGGTTCGGAAGCTTGGATATGGTGAGGCTCCATTGGCCGAACGTATTCCGTATCAAGACCTGGCTGTGCCCGACACGTCGCGGCAGCCCGCACCCTGA
Protein sequence:
MNPLRSIQHNITTPPISGGQPLDAVGPQAQQSHPKRISPSQLSQSAHQALERLSANAEHQRLASLVRNALQDGTFQFQSSNHTQVTYKASICLPADTDTVRTDHLINNELTVQAQLNDQSEYDIVSAHLHGSSKAISFDVPSPPPAHGSASSVLSERTHLGMSRVLSQDAVDSSSLETPLLSSPDHSRPPSQPKPVHIGSVRRESGNLVSDNPVVQALLSFAQADQAFPPQAASIAGVQLEMRPRRDIEKALEEFKGAFTVEKAQLMSGANSSERVDEDVNADIHIPLLLKAIERGAAAFGPNASIGQNSAKAFLASCAPKITSNDDVLSEFINQKLKGDDDLQVRLGAQELLHVATKKEFQLGGLAGSIGVSSILGSAWELGASELLKNAIFGKNFSPSQYALQLAGIDSVPPLIIESMDTMCVLAIIKGMKGEEWSMSDLLPKALKAGAISSVVSFPNNVLQYAGFKSRVGDLAANSVTTEAAIFGAASGIPPEVKESEELMRAGLFQSMKDGVMAHPGEGVDTKKTIERMTRHALDIAPGESTAVKSMGLASIVGMIPLIASNKATGLLSEQVLRIFRSAVFNPIEAIALNALALGGRVNVPGLFDSDNAKHARVAQTILARASQHMEAGDRDISAEELHQMLAPRSEFLRHVGSAIVNGMNASFEAIPALVRKLGYGEAPLAERIPYQDLAVPDTSRQPAP
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
75010 705 5.82 -0.149 46.76
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.