Effector profile
PlantPEAD ID: PlantPEAD19054 Uniprot ID: A0A1S6YAJ5 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 53409 Pathogen type: Bacteria
Species: Pseudomonas coronafaciens Strain: pv. garcae strain 2708 Other name:
Gene name: HopD1 NCBI Gene ID: KY362367
Entry name: A0A1S6YAJ5_9PSED Protein name: Type III effector HopD1
DOI:
Gene/Protein information
Gene sequence:
TCAGGGTGCGGGCTGCCGCGACGTGTCGGGCACAGCCAGGTCTTGATACGGAATACGTTCGGCCAACGGAGCCTCACCATATCCAAGCTTCCGAACCAGCGCGGGAATTGCCTCAAAGCTGGCATTCATGCCGTTGACAATCACAGATCCCACATGACGCAGGAACTCGCTCCGGGGAGCCAGCATTTGATGTAGCTCCTCTGCGGAAATGTTACGGTCTCCAGCTTCCATTTGCTGGCTGGCCCGCGCAAGAATGGTTTGTACCACGCGTGCATGTTTGGCATTGTCGGAATCAAATAGCCCGGGAACGTTGACACGCCCGCCAAGCGCCAACGCGTTCAGAGCGATGGCTTCGATTGGATTGAAGACGGCGCTCCGGAAAATACGCAGTACCTGTTCCGACAGCAGCCCGGTTGCCTTGTTGCTGGCAATCAGTGGAATCATCCCGACAATAGATGCCAGCCCCATGGACTTGACAGCGGTGCTTTCGCCCGGAGCGATATCCAGCGCATGGCGCGTCATCCGCTCAATCGTCTCTTTAGTGTCCACCCCCTCGCCTGGATGAGCCATCACGCCGTCCTTCATGCTCTGGAACAAGCCAGCACGCATCAGCTCTTCACTTTCCTTGACCTCGGGTGGAATACCGGAGGCGGCGCCAAAGATTGCCGCTTCAGTTGCCACCGAGTTAGCCGCAAGATCGCCTACTCTGGATTTGAAGCCTGCGTACTGCAAAACATTATTGGGGAATGAGACCACCGATGAGATGGCGCCGGCCTTCAACGCCTTGGGGAGTAGATCGCTCATGGACCACTCCTCACCTTTCATGCCCTTGATGATGGCAAGTACGCACATGGTGTCCATGGACTCGATCATCAAAGGAGGCACTGAATCGATTCCAGCCAATTGCAGGGCATATTGGCTCGGTGAGAAATTTTTGCCGAAGATGGCATTTTTCAACAGCTCCGAAGCGCCAAGCTCCCATGCCGAGCCGAGTATGCTGCTGACCCCGATGCTGCCGGCTAGACCGCCGAGCTGGAATTCCTTCTTGGTGGCTACATGCAACAACTCCTGTGCGCCCAGGCGAACCTGAAGATCGTCGTCCCCCTTGAGTTTCTGGTTGATGAACTCGGAGAGGACATCGTCATTGGACGTGATCTTGGGAGCACATGAGGCGAGAAACGCTTTCGCGCTATTCTGGCCGATTGATGCGTTTGGACCAAATGCCGCAGCCCCCCGCTCGATGGCCTTGAGCAATAAGGGGATATGGATGTCTGCGTTGACATCCTCATCTACACGCTCCGACGAGTTGGCACCGGACATCAGTTGCGCCTTCTCCACCGTGAAGGCGCCTTTGAATTCCTCAAGTGCTTTCTCAATATCCCGACGTGGCCGCATTTCCAGCTGGACCCCGGCAATGCTCGCGGCCTGTGGTGGAAATGCCTGGTCGGCCTGCGCGAAGGCTAGCAGTGCGTGCACTACCGGGTTATCGGAAACAAGGCTGCCAGAGTCCCTGCGGACTGATCCGATATGCACGGGCTCTGGCTGTGATGGCGGACGAGAATGTACTCGCGAGCTCAGTAACGGACTTTCCAAGCCACTGCCATCTACTGCATCTTGTGAGAGAACGCGACTCATACCTAGATGGGTCCGTTCACTCAAGGCTGAAGATGCTGAACCATGTGCAGGCGGGGGGCTGGGCACATCGAAGGATATGGATCTCGAAGAGCCATGCAAATGGGCACTGACGATGTCGTACTCCGATTGATCATTTAATCGGGCCTGAACCGTCAGCTCGTTATTAATCAAGCGTTCGGTTCTCACGGTATCGGTATCGGTATCGGTATCGGTGCTGGTGTCAGCTGGCAGGCATACTGGCGCTTTATAGGTTACTTGCTTGTCGTTACTGGATTGAAATTGAAGTGTGCCATCCTGCAGAGCGTTGCGTACCAGTGATGCAAGGCGTTGGTGTTCGGCATTAGCTGAAGGGCGTTTTAGAGCCTGGTGAGCGCCTGGGCTCAATTGAGAGGGTGAAATCCTTTTAGGGTGAGATTGCTGGGCCTGAGGGCCCACCGCGTCTAATGGCTGACCGCCACTGATCGGGGGAATTGTAATGTTGTGTTGAATAGATCGTAGAGGATTCAT
Protein sequence:
MNPLRSIQHNITIPPISGGQPLDAVGPQAQQSHPKRISPSQLSPGAHQALKRPSANAEHQRLASLVRNALQDGTLQFQSSNDKQVTYKAPVCLPADTSTDTDTDTDTVRTERLINNELTVQARLNDQSEYDIVSAHLHGSSRSISFDVPSPPPAHGSASSALSERTHLGMSRVLSQDAVDGSGLESPLLSSRVHSRPPSQPEPVHIGSVRRDSGSLVSDNPVVHALLAFAQADQAFPPQAASIAGVQLEMRPRRDIEKALEEFKGAFTVEKAQLMSGANSSERVDEDVNADIHIPLLLKAIERGAAAFGPNASIGQNSAKAFLASCAPKITSNDDVLSEFINQKLKGDDDLQVRLGAQELLHVATKKEFQLGGLAGSIGVSSILGSAWELGASELLKNAIFGKNFSPSQYALQLAGIDSVPPLMIESMDTMCVLAIIKGMKGEEWSMSDLLPKALKAGAISSVVSFPNNVLQYAGFKSRVGDLAANSVATEAAIFGAASGIPPEVKESEELMRAGLFQSMKDGVMAHPGEGVDTKETIERMTRHALDIAPGESTAVKSMGLASIVGMIPLIASNKATGLLSEQVLRIFRSAVFNPIEAIALNALALGGRVNVPGLFDSDNAKHARVVQTILARASQQMEAGDRNISAEELHQMLAPRSEFLRHVGSVIVNGMNASFEAIPALVRKLGYGEAPLAERIPYQDLAVPDTSRQPAP
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
75781.9 713 5.75 -0.158 50.32
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.