Effector profile
| PlantPEAD ID: PlantPEAD19067 | Uniprot ID: Q8RK06 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. glycinea | Other name: Pseudomonas savastanoi pv. glycinea |
| Gene name: AvrPphDPgy | NCBI Gene ID: AJ439731 | |
| Entry name: AVRD1_PSESG | Protein name: Effector protein AvrPphDPgy | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAATCCTCTACGATCTATTCAACACAACATTACAACTCCCCCAATCAGTGGCGGTCAGCCATTAGACGCGGTGGGCCCTCAGGCCCAGCAATCCCATCCTAAAAGGATTTCACCTTCTCAATTGAGCCAAAGCGCTCACCAGGCTCTAGAACGCCTTTCAGCTAATGCCGAACACCAACGCCTTGCATCACTGGTACGCAACGCTCTGCAGGATGGCACATTTCAATTTCAATCCAGTAACCACACGCAAGTAACCTATAAAGCGTCAATCTGTCTGCCAGCTGACACCGATACCGTGAGAACCGACCACTTGATTAATAACGAGCTGACGGTTCAGGCCCGATTAAATGATCAATCGGAGTACGACATCGTCAGCGCACATTTGCATGGCTCTTCGAAAGCCATATCCTTCGACGTACCCAGCCCCCCGCCCGCACATGGTTCAGCATCTTCTGTCTTGAGTGAACGGACCCATCTAGGTATGAGTCGCGTTCTCTCACAAGATGCAGTAGACAGCAGTAGCCCGTTACTGAGCTCGCCAGACCATTCTCGTCCGCCATCACAGCATATCGGGTCGGTCCGCAGGGACTCTGATAGCCTTGTTTCCGATAACCCGGTAGTGCAGGCCCTGCTATCGTTTGCGCAGGCCGACCAGCAATTTCCAACACAGGCCGCGAGCATTGCCGGGGTCCAGCTGGAAATGCGGCCACGTCGGGATATTGAGAAAGCACTTGAGGAATTCAAAGGCGCCTTCACTGTGGAGAAGGCGCAACTGATGTCCGGTGCCAACTCGTCGGAGCGGGTAGATGAGGATGTCAACGCAGACATCCATATCCCCTTATTGCTCAAGGCCATCGAGCGGGGGGCTGCGGCATTTGGTCCAAACGCATTGATCGGCCAGAATAGCGCGAAAGCGTTTCTCGCCTCATGTGCTCCCAAGATCACGTCCAATGACGATGTCCTCTCCGAGTTCATCAACCGGAAACTCAAGGGGGATGACGATCTTCAGGTTCGCCTGGGCGCACAGGAATTATTGCATGTAGCCACCAAGAAGGAATTCCAGCTCGGCGGTCTAGCCGGCAGCATCGGGGTCAGCAGCATACTCGGCTCGGCATGGGAGCTTGGCGCTTCTGAGCTGTTGAAAAATGCCATCTTCGGCAAAAATTTCTCACCGAGCCAATATGCCCTGCAATTGGCTGGAATCGATTCAGTGCCTCCTTTGATGATCGAGTCCATGGACACCATGTGCGTACTTGCCATCATCAAGGGCATGAAAGGTGAGGAGTGGTCCATGAGCGATCTACTTCCCAAGGCGTTGAAGGCCGGTGCTATTTCCTCGGTGGTGTCATTCCCCAATAATGTTTTGCAGTACGCAGGTTTCAAATCCAAAGTCGGCGATCTTGCGGCAAACTCAATGACAACTGAAGCGGCCATCTTTGGCGCCGCCTCCGGTATTCCACCCGAGGTCAAGGAAAGTGAAGAGCTGATGCGTGCTGGCTTATTCCAGAGCATGAAGGACGGCGTGATGGCTCATCCAGGCGAGGGGGCGGACACCAAAAAGACGATTGAGCGGATGACGCGCCATGCGCTTGATATCGCTCCGGGCGAAAGCACCGCTGTCAAGTCCATGGGGCTCGCATCTATTGTCGGGATGATTCCACTGATTGCCAGCAACAAGGCAACCGGGCTGCTGTCGGAACAGGTACTGCGTATTTTCCGGAGCACCGTCTTCAATCCAATCGAAGCCATCGCTCTGAACGCGTTGGCGCTTGGCGGGCGTGTCAACGTTCCCGGGCTATTTGATTCCGACAATGCCAAGCATGCACGCGTGGTACAAACCATCCTTGCGCGGGCCAGCCAGCACATGGAAGCTGGAGACCGTGACATTTCCGCAGAGGAGCTACATCAAATGCTGGCTCCCCGGAGCGAGTTCCTGCGCCATGTGGGATCTGCGATTGTCAACGGCATGAATGCCAGCTTTGAGGCAATTCCCGCCCTGGTTCGGAAGCTTGGATACGGTGAGGCTCCATTGGCCGAACGTATTCCGTATCAAGACCTGGCTGTGCCCGACACGTCGCGGCAGCCCGCACCCTGA
Protein sequence:
MNPLRSIQHNITTPPISGGQPLDAVGPQAQQSHPKRISPSQLSQSAHQALERLSANAEHQRLASLVRNALQDGTFQFQSSNHTQVTYKASICLPADTDTVRTDHLINNELTVQARLNDQSEYDIVSAHLHGSSKAISFDVPSPPPAHGSASSVLSERTHLGMSRVLSQDAVDSSSPLLSSPDHSRPPSQHIGSVRRDSDSLVSDNPVVQALLSFAQADQQFPTQAASIAGVQLEMRPRRDIEKALEEFKGAFTVEKAQLMSGANSSERVDEDVNADIHIPLLLKAIERGAAAFGPNALIGQNSAKAFLASCAPKITSNDDVLSEFINRKLKGDDDLQVRLGAQELLHVATKKEFQLGGLAGSIGVSSILGSAWELGASELLKNAIFGKNFSPSQYALQLAGIDSVPPLMIESMDTMCVLAIIKGMKGEEWSMSDLLPKALKAGAISSVVSFPNNVLQYAGFKSKVGDLAANSMTTEAAIFGAASGIPPEVKESEELMRAGLFQSMKDGVMAHPGEGADTKKTIERMTRHALDIAPGESTAVKSMGLASIVGMIPLIASNKATGLLSEQVLRIFRSTVFNPIEAIALNALALGGRVNVPGLFDSDNAKHARVVQTILARASQHMEAGDRDISAEELHQMLAPRSEFLRHVGSAIVNGMNASFEAIPALVRKLGYGEAPLAERIPYQDLAVPDTSRQPAP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 74457.4 | 698 | 5.88 | -0.159 | 46.98 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: