Effector profile
| PlantPEAD ID: PlantPEAD19305 | Uniprot ID: A0A0W8CDS4 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 4790 | Pathogen type: Oomycota |
| Species: Phytophthora nicotianae | Strain: Race 0 | Other name: Brown rot and root rot of citrus agent, buckeye rot agent, pineapple heart rot agent, pistachio foot rot agent, sesame blight agent |
| Gene name: | NCBI Gene ID: LNFO01003786 | |
| Entry name: A0A0W8CDS4_PHYNI | Protein name: 26S protease regulatory subunit 6B | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCATCTTTTAATTTTTATGAGCTTCGAGACGAGCTTAAGCAATTTCCATTTGCTTGGTGTGACCTTGGCATTCGCAGCTAGAGTTTGATCGAAGCTCACCACCGAAATCTTCCTCTTACTAAAAACTTGCTCGAGCTTCGCCGCCAAAGCCTGCTCCTTATTTAGAGTTTGCCCAATCTTCACCAACGACTGTTTCTTTTTTACCTTTTCCTCGACCGCCACCAACAAAGCCTGAAATTCTGGTGTCTTGCCTTTTTCTTCATTGATCATCTTCACCAACGGCTTATAATCGTCATCTTCCAGCATATCGTTCAGAAAGTTCATATAGAATTCGTACTTTTTGAATTCCGAGGTACCCTTGAATTCTTCTATCCCTGGCAAGCCGCTCGTGATGAATTGGGCCATCTGTTCCGCAATACCCAACTTTCTAGCGTACATTTCCCTGGATATCCCCTCCTTCATCATCGCCTTCATGTCATCCATAGACAGTGGGGGTTCGACGAACATCAGGGACCTTTCTTCATTTTCAGCGTTGCGTTTAATTATAGTGTGGTGAGTCCTCAGAAGCCGCTGGACTTGACTGGTGGGCGTTGCAACGTTGGAATTCTGGTCGGAGGCTGGAGCCATGGGGAATACCTCACTGGCAAACAAGAGAGTCACGCCGATCAACACCACCAACGCACGGGCTTGACGCAT
Protein sequence:
MRQARALVVLIGVTLLFASEVFPMAPASDQNSNVATPTSQVQRLLRTHHTIIKRNAENEERSLMFVEPPLSMDDMKAMMKEGISREMYARKLGIAEQMAQFITSGLPGIEEFKGTSEFKKYEFYMNFLNDMLEDDDYKPLVKMINEEKGKTPEFQALLVAVEEKVKKKQSLVKIGQTLNKEQALAAKLEQVFSKRKISVVSFDQTLAANAKVTPSKWKLLKLVSKLIKIKR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 26272.8 | 231 | 9.54 | -0.291 | 37.92 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR040691
Pfam: PF18488
SMART:
KEGG:
PRINTS: