Effector profile
| PlantPEAD ID: PlantPEAD19309 | Uniprot ID: A0A8T1WQJ3 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 109152 | Pathogen type: Oomycota |
| Species: Phytophthora boehmeriae | Strain: SCRP23 | Other name: |
| Gene name: TFB2M | NCBI Gene ID: JAGDFL010000204 | |
| Entry name: A0A8T1WQJ3_9STRA | Protein name: rRNA adenine N(6)-methyltransferase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCTCGACTGGTACGAGCGTCGCCTCTGAGCTTGTTGCATCGCCGCTGGGCGTCCACTTCCAACGTCTCTCGTCTCCATGAGACGCCACACTTGAAGCGCAAATTGGGCCAGCACTTGCTCGTCTCCGATGGCATTTTGGACCAAATCGTAGCCGCCGCAGAGCTTTCGGCCGTCGACAATGGCAAAGACAAGCTCCGAGTGCTGGAAATTGGTCCTGGAACGGGTAATTTGACGTCTGCATTGCTGCAAATCGACGCTAAAATTCAGGTACACGCCGTGGAGTTCGACAGGCGGATGGTGGAGCAATTGCAGCGTCGATTCGCGACGGAGATCGAGAGTGGCAGTCTCGTGCTGGAGCATTCAGACTTTGAGGACTTTCAATTCAACTCTGAGACGGACGAAGACAATAACAGCTTCGACGCCTGCGTGGCCAACATCCCGTACCAATTGTCGTCCCTGGTAGTGTCCAGACTCTCGAGTTACATGCACCGCTTCCCGACCTTCCAGTGCGCTGTTTTGCTGGTTCAAGAGGAGTTTGCGTTGCGACTTCTGGCCCAACCAGGCAACAAGAACTACAGTCGATTGAGCGCCAACACAGCACTAGTAGCGGACGTGACGTCCGTGGTGCCGGTGCCCAGGAAACACTTCTTACCACCGCCGAAAGTGGACTCTCGAGTCATCAAGATGACCCCAAAAGTGTCGGCACTTCCGGCTGACAACTTGTTCTTCCAGAAGTTCGATGCTCTGCTGAGATTGTGCTTTGAACGCAAGAATAAAACGTTGAGAGCACTGCTGCTTGCCAAGACGGCGCGATCGCAGTATTTGTTGCTGGACGATGCAGTGGCTGAAGGTGAAGACAAGCATCAGGTCGTGACGGAGCGTGTGGAGGGAGCACTAGAGGCCTGCGGACTGACGTCCAACCGCGCCGTCAAGATATCAGTGACCGAGTTCATGCGGCTGATGCAAGAGCTGCATGACCGAGGCATCGACCTGCGCCCCAGCACCACTCGTCACTTTAAGGACTGA
Protein sequence:
MSRLVRASPLSLLHRRWASTSNVSRLHETPHLKRKLGQHLLVSDGILDQIVAAAELSAVDNGKDKLRVLEIGPGTGNLTSALLQIDAKIQVHAVEFDRRMVEQLQRRFATEIESGSLVLEHSDFEDFQFNSETDEDNNSFDACVANIPYQLSSLVVSRLSSYMHRFPTFQCAVLLVQEEFALRLLAQPGNKNYSRLSANTALVADVTSVVPVPRKHFLPPPKVDSRVIKMTPKVSALPADNLFFQKFDALLRLCFERKNKTLRALLLAKTARSQYLLLDDAVAEGEDKHQVVTERVEGALEACGLTSNRAVKISVTEFMRLMQELHDRGIDLRPSTTRHFKD
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 38437.1 | 342 | 8.31 | -0.21 | 46.49 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR001737,IPR020596,IPR020598,IPR011530
Pfam: PF00398
SMART: SM00650
KEGG:
PRINTS: