Effector profile
PlantPEAD ID: PlantPEAD19978 Uniprot ID: G0CIQ6 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 339 Pathogen type: Bacteria
Species: Xanthomonas campestris Strain: pv. raphani 756C Other name:
Gene name: XopF1 NCBI Gene ID: CP002789
Entry name: G0CIQ6_XANCA Protein name: Type III effector protein XopF1
DOI:
Gene/Protein information
Gene sequence:
ATGAAGCTCACCAGCGACATCGGCACCTCTTCCAGCAGCCGGGCAACGTCGCCGGCCCCCACACACCAGACGCAGGGCGAGGAGGCCATGGCCCCGCCCCAGAAGCGGTTGCCAACCGGGCCGCTTGCCGGCTTGCCCTCTCCGGGCCCGGTGTTGCGTGGTCGTCGCGCAGCGCTTTCACGTCGCGCGGCGACCGAGGCAAGTCATGCCGAGTCCTCGCATGGCGCATCCCATCGCTCGGAGTCCTCGCACTCGTCGCATTCTTCGGAGCTGACGGATGCATCGTTTTACACTCCGCAGCCAAGCCCCGCGTCCTCGGTCATCGACGCGCCTGCCGCTGCAGCGACCTATGCGCAGCGCAGCGCGTCGACCGCCGCTGACTTGAAGGCGCAGATACGTACACACCTGGACAAACTGCCATTTGCAGCGCCCTCGGAGGGGCAGGAGGCGCTGCAGGCCGCCTATCTGGAATGGGCTGACGCGCGCATGCAGGAACGCATCACCGCGTTCGGGCCGGACGCCGGATACCAGGTCGTCGGCGATATGAAGGCGGCAGGCGCGAAGGCAGCGTGGCCGATCGCCTACGAGTGTCTCAGGGCCTTCGTCATCGGCTCGATGCGGACTCCGTTCGGTCTTGCCGCGGGCGCCGCCTACGACAGTTCGCGCCCGCCTGGATCGGAGACGCTGAGTACGTCAACGCTGTCCGGTGCGGTGGCGGGCGTTGTGTCCTATGCCAGCGATACGTTGCTGATCCCGGCAATGGATCGGCGCGCGCGCGTTGCCAATTTGCCGCGGTTCCAGGCCATCGACCCCAAGATCCTGGTGCCCGATCCGCCGCCGGTCTTGCTGGAAATCACCGCCGAAGGCAAGCGTTTCACGCGCCCGGGCGAGGGCAACGCGCCCACGCTTGCGCAGCTCAAGGCGCAGACCTACGACATCCGCCAGGGAATCACCCAGTGGCAATCGACGTTGGACGACAAATCCCTGGACACCTTGTTGCTCAAGCCGACGATCAATGCAGGATTCAACGCGGCGCGGCGGACCTCCGACGACCCGGGCACGCGCACGCCGGCCGGCCAACTGGGGTTGAGCGCGCTGGCCATTGGCGGGGCCGGGGTCGTGCAGAAGGCGATGCTCGAAACCGGCAAGGCGATGGCGCGTACCGGCCAGGTGAGCGTCCCCGACCTGCTTGGCGGACAGCAGCGGTTGAATCTGTTTTCGCTGGCAGTGCCGGACAAGACGCGTCGGCCTGCGCAATGGTCCGACGCTGTGTATTTTCCTCCCAACTATCTGCTGGAGACCGGGAAAGAAGGCCTGGCGTTGGCCAGGCAGGCCTTGAGCACCACCAACGCGATTACCACTGCGCTACGCGATGTGCTGGGCCGTCACATGCTCAGCAACGTGCTGGCCAATTTTGCCTCGCTCGGGGCCGGCCGCCTGATCGCTGCGCCGTTGCGCGGCGGCAACGAGAACGGCAGCGTTGCAGGCGAAGCCGCCAATTCCACCGCCACGGTCGTGCAGCAGGCGGTACAGACCCTGTTCAACGATACGGTCTGGAATGCGCTCAAGGCCAAGAACGGCGCCAACACCACCCAGGCGACGCGACTGGATCAGGAACGTGCCGTCACCGCGGCCAATCATCAACGCACCATCGAACGCACGCTTCAGGCGCTGGCCGAGCCCATCGACGAGGCGATCGCGCTGTTTTCGGCGCCGACGCCGGCGGAGATTGCACGCGCCCTGGAAGAGGGGGTACGGCTTGCGCCTGCACCGGGGCCGCTGGCGAGGATGTTGCGTGAAACGCTTGAGCGATTGCGTACGGAAATCGACACGCAGTGCATCTCGATTGCGACCATCGACGCGGTGCGCGATCAGCTGCATGCCGGCTGGGCGGCGATGTTCAGCGGTGTGCCACGTGACGACGTGACCAAGACACTGGACACCGAGTTACGCACGCTCAGGCGTGCACTGCACGAGAGCGAGGAACTTCGTCAGTGGGAGAATGGCCGGCCGTGA
Protein sequence:
MKLTSDIGTSSSSRATSPAPTHQTQGEEAMAPPQKRLPTGPLAGLPSPGPVLRGRRAALSRRAATEASHAESSHGASHRSESSHSSHSSELTDASFYTPQPSPASSVIDAPAAAATYAQRSASTAADLKAQIRTHLDKLPFAAPSEGQEALQAAYLEWADARMQERITAFGPDAGYQVVGDMKAAGAKAAWPIAYECLRAFVIGSMRTPFGLAAGAAYDSSRPPGSETLSTSTLSGAVAGVVSYASDTLLIPAMDRRARVANLPRFQAIDPKILVPDPPPVLLEITAEGKRFTRPGEGNAPTLAQLKAQTYDIRQGITQWQSTLDDKSLDTLLLKPTINAGFNAARRTSDDPGTRTPAGQLGLSALAIGGAGVVQKAMLETGKAMARTGQVSVPDLLGGQQRLNLFSLAVPDKTRRPAQWSDAVYFPPNYLLETGKEGLALARQALSTTNAITTALRDVLGRHMLSNVLANFASLGAGRLIAAPLRGGNENGSVAGEAANSTATVVQQAVQTLFNDTVWNALKAKNGANTTQATRLDQERAVTAANHQRTIERTLQALAEPIDEAIALFSAPTPAEIARALEEGVRLAPAPGPLARMLRETLERLRTEIDTQCISIATIDAVRDQLHAGWAAMFSGVPRDDVTKTLDTELRTLRRALHESEELRQWENGRP
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
71128.1 671 8.39 -0.289 43.11
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.