Effector profile
| PlantPEAD ID: PlantPEAD20545 | Uniprot ID: A0A5B0RK32 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5297 | Pathogen type: Fungi |
| Species: Puccinia graminis | Strain: f. sp. tritici strain Ug99 | Other name: Black stem rust fungus |
| Gene name: LCC2_4 | NCBI Gene ID: VDEP01000180 | |
| Entry name: A0A5B0RK32_PUCGR | Protein name: Laccase, multicopper oxidase, benzenediol:oxygen oxidorectuctase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAGCACACTTTATTCTTTGTCTCCTTGCTAGCCTTAGCCTCAGTGGAGTGCTCTCCAGCAGGCTCCACCCCACCTGGAGGTGATCACAACACTGGCGCCGAGAATAGTGTGGCGAAGACGATGGGAAAAATCGATGAATCAAAGTGCAAAGGAGAAAAAATGGAATGGAGCAAAGAAAAAACTCCGTGGCAGAACTCAATGCTTGCCGATAACTTTGTGCTTTATCAGAACATCTGGAAAAGTGATCAAGTTCTGGCCACAGGCAAGAGTGAAATCACGTGTAAAAGCTTCAAGAATGGTAACTTGGCTTGGCAAACGACATTTGACCTACCGTCTGCTCCTGAGAATGCAAAGCAGGTCAAGGCATACACCAATGTAGCTTGGGTCAAACCCTCGTTGACTGGAGGACAGAAAACGCAGTCAATCCAAGTCAAGAATGCAAAGGTATTCAACACTGCTTGGGACTGGCAACTTACTGGGGACTCGAAAGACCTTGTTGCGGATGTGTCTTATGATATATTTTTGTCCAAGGATCCTACCTGTCAGAAGCAGGAGTGCGCCTCCAGGGAAATTATGGTCTGGTTAAGCGCAATTGGTGGAGCACGACCCGCCGGAGCACGCGCCCAAGCAAATGGCGGCACACTCAAACTCGGTGGAAAGTACGAATTCCAAGTCTGGCAAGGCACCTCCCAAGTCCCGGTAGTTTCCGTCTTCCCAGCCCAGGAAAACCAAAAGTTTACGTCGTTCAGCGCGGACATGAAAGAGCTACTGAAAAACCTTGGACCTTTCGGGGTTAGTCAGGACGAGTATCTGGTTAGCGTTGGCGCCGGAATCGAAATCTTCACTGTTCGTATCGACAATTCCTTTCAAACACTTGACTCTTTCCTTTTTCAAATTATTGCTGTTGTTGACACCTCCAATTTACTTCATTTTATGTAG
Protein sequence:
MKHTLFFVSLLALASVECSPAGSTPPGGDHNTGAENSVAKTMGKIDESKCKGEKMEWSKEKTPWQNSMLADNFVLYQNIWKSDQVLATGKSEITCKSFKNGNLAWQTTFDLPSAPENAKQVKAYTNVAWVKPSLTGGQKTQSIQVKNAKVFNTAWDWQLTGDSKDLVADVSYDIFLSKDPTCQKQECASREIMVWLSAIGGARPAGARAQANGGTLKLGGKYEFQVWQGTSQVPVVSVFPAQENQKFTSFSADMKELLKNLGPFGVSQDEYLVSVGAGIEIFTVRIDNSFQTLDSFLFQIIAVVDTSNLLHFM
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 34320.9 | 313 | 6.34 | -0.247 | 26.87 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR013320,IPR013319,IPR002594
Pfam: PF01670
SMART:
KEGG:
PRINTS: