Effector profile
| PlantPEAD ID: PlantPEAD20642 | Uniprot ID: C6DJN7 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 554 | Pathogen type: Bacteria |
| Species: Pectobacterium carotovorum | Strain: subsp. carotovorum strain PC1 | Other name: Erwinia carotovora subsp. carotovora |
| Gene name: | NCBI Gene ID: CP001657 | |
| Entry name: C6DJN7_PECCP | Protein name: Secretory lipase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTTCCATTCACCTCAGATACAGCGAAGCGTATTGACGTTATTTTTTGTGATATCGGTTGGTATGTTGCCTCTGCGTTCTTCTGCAGAGGCGGACACGCCCGGTTCTTTGACTGAAAAAACGACGCTGGATGCGAAAAATGGCCTACAGGAAGCAGCAGAACAGTATCTGATTCGATACCGTTCGTTGAGCGGCGTGGATGGCAAAAGCCCACGGGAAGACACCGGTGCTGTGTTTATCCCGAAAGGCGAAGCGCCAAAAGGGGGCTGGCCCGTCGTCGTGTGGGCACATGGGACGGTCGGCGTGCAGACAAGCTGTGCGCCTTCTCTTAATCCACGTTCCGCGCGTGATGCACAGTATCTGAATACGTGGTTGTCGCTGGGGTTTGCCGTCGTGGCCCCGGACTATGCGGGGCTCGGCTCCCCTGGGTTGCATCACTATCTCAATGCGCGAGGGGAAGCGTGGAGCGTGCTGGACGGCGTGAAAGCTGCGCTTGGCGCATTCCCGCTACGCAATCAGTTGACCATTGTGGGGCAGTCGCAGGGTGCTCATGCGGCCTTTGCAAGCGTGGGGTATCAGCCTGACTATGCGCCGGATCTGCATATTGTCTCAACCGTGTTGACCGGCGTCCCTTATTTTGATGATAAGACCTCTGCGGCGGCACTTTTCGCCGGCGGTGGCGGGGTGAAAGAGGGCGGCGATCCCAAAATACCCTATGCGATGTACATCTATCTGTCAGCCGCTGATACAGAAAAAGGGCTGAATATTGATGATTATTTCACGCCGAAAGCCGCTGCTGATGTGTCCGCCGCGCGTGAAATGTGTATCGATGCGTTAACGAAAAAAGTGATGGATGATGGCCTGAATGCGGGCAATAGCCTGAAGCCCGCAACACAGGGATTACTGGAAAGCCAGACGGCAAGTCTGCGCTATAACACCCTGAAAATCGCCCATCCGGTATTTATTGGCACTGGGACGCAGGATATTGACGTACCGGCCATCATGCAGCGCGCATTCGCGCGTGATATCGCTAAAGCCGGAACGTCCGTTGATGTGCATGAATATAAGGGGATGAATCATGATGAAACCGTTAACGTTTCACTACGTGACTCCGTTCCTTTCGTACTGAAAAATCTGCATGCTGACACGAAAAAACACTAA
Protein sequence:
MFHSPQIQRSVLTLFFVISVGMLPLRSSAEADTPGSLTEKTTLDAKNGLQEAAEQYLIRYRSLSGVDGKSPREDTGAVFIPKGEAPKGGWPVVVWAHGTVGVQTSCAPSLNPRSARDAQYLNTWLSLGFAVVAPDYAGLGSPGLHHYLNARGEAWSVLDGVKAALGAFPLRNQLTIVGQSQGAHAAFASVGYQPDYAPDLHIVSTVLTGVPYFDDKTSAAALFAGGGGVKEGGDPKIPYAMYIYLSAADTEKGLNIDDYFTPKAAADVSAAREMCIDALTKKVMDDGLNAGNSLKPATQGLLESQTASLRYNTLKIAHPVFIGTGTQDIDVPAIMQRAFARDIAKAGTSVDVHEYKGMNHDETVNVSLRDSVPFVLKNLHADTKKH
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41118.5 | 386 | 6.12 | -0.124 | 28.9 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR029058,IPR005152
Pfam: PF03583
SMART:
KEGG: pct:PC1_0393
PRINTS: