Effector profile
| PlantPEAD ID: PlantPEAD20771 | Uniprot ID: A0A3M3JF51 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. coriandricola strain ICMP 12341 | Other name: |
| Gene name: | NCBI Gene ID: RBOV01000308 | |
| Entry name: A0A3M3JF51_9PSED | Protein name: Zona occludens toxin N-terminal domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCATGGTTTTAAACTGTTGCTCATTCGACTTGAGTCTTCAACCACAGTGAACTGAGCACCTCGTGAGGGATGTGGTGTTTGACTTGCATCAATAGGCATTGATGCTTGAACAGCCTGAGCAGGAACAGACGACTGTGATACAGCAAGCGTGCCCTGCTGACCGTGCCTGCCAGTAAGCCACGGATCAAACGATCCATACCGAACAAAGACCTGACAAGCACCCAACGGTATATCAAGCGGCGTTGCCTGCTGCGTGTAGCAATTGCAGGTATTACGCTCCTGTGAGGCCATACAGGCAGCCACACGTGGAAAATCAGTAGGTGCTGTCAGTTCGTCATAGACAGGTGCACTGTGCGGCATCCCTGGGATAACAGGCGTTTGTGACTCCTTTGTCCATCGAGGCGGCGGCGGTTGATCAGTGCCAGGCAGTGGATTACCGACAATGCCAGCTGGCCTACTCTGAGATTGAACTTGAGAGGCTGCAGGTGTGTGCTGTGCAGCTATGGCAGCAGGTTCGGCCTCTTTCGTGATCTGAGAAACACGATAAGTACCAAGACCAATGCCGACGATTGCAATCAAAGCAAACACACTGAATGCAATGATGATCTTCCACGGCGGACGAGCTTTATGGGTATCAAGCACAGTTGACGTATATAACTTGAAAACGTCTGGGTTTGGTGCAACAGACTTGCGAGTTCCCATTGCCTTAGAAGACTTGGCATTAGGATCATTCTGAACAGTGTCCCAAGAATACTGGTAACCCTTCATGTTCCATGGACGTATGTAATGAACATGAGGCTTTGCAAGTTTGCGAGCAAAGGTATGCAAGAACATAGGACTTTGAGTCGTAAAGATAAAGTCAAAGCCGCGATGACGGTGACGTGCAAGTTGCTGGACCCATGGAGGAGCCTCCTTGCCGAGGTTTGTGCCACAGTAGTCCTGTACCTCGTCACAGAAGATTACAGAGCCGTCAGGAAGCTCTTCCCATCCGCTGATATGCTCAATTGCGGTAACGCCATGTGCAGCAGGATCAAATCCATTGACGGGCGTACAGAACTTAGGCCGTCCCTGATACTGAGGAGCATATAGGAAGTCCCAAAGTTCATTAGAAGTTTTGCCATCACCGGGCGAACCGGTTACTAACTTAAGCAC
Protein sequence:
MLKLVTGSPGDGKTSNELWDFLYAPQYQGRPKFCTPVNGFDPAAHGVTAIEHISGWEELPDGSVIFCDEVQDYCGTNLGKEAPPWVQQLARHRHRGFDFIFTTQSPMFLHTFARKLAKPHVHYIRPWNMKGYQYSWDTVQNDPNAKSSKAMGTRKSVAPNPDVFKLYTSTVLDTHKARPPWKIIIAFSVFALIAIVGIGLGTYRVSQITKEAEPAAIAAQHTPAASQVQSQSRPAGIVGNPLPGTDQPPPPRWTKESQTPVIPGMPHSAPVYDELTAPTDFPRVAACMASQERNTCNCYTQQATPLDIPLGACQVFVRYGSFDPWLTGRHGQQGTLAVSQSSVPAQAVQASMPIDASQTPHPSRGAQFTVVEDSSRMSNSLKP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 41938.5 | 383 | 8.4 | -0.378 | 46.52 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR027417,IPR008900
Pfam: PF05707
SMART:
KEGG:
PRINTS: