Effector profile
| PlantPEAD ID: PlantPEAD20890 | Uniprot ID: A0A6A3DMC0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 53985 | Pathogen type: Oomycota |
| Species: Phytophthora fragariae | Strain: A4 | Other name: |
| Gene name: | NCBI Gene ID: QXGF01003230 | |
| Entry name: A0A6A3DMC0_9STRA | Protein name: RxLR effector protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGTCTTTCCAACACCCTCGTGGTGGCCTGTGCGACCGTCCTTCTTGCCAGCGGGCACGCGTTGTCTGAGACCGTGAATATCGACCAGGCTACCGTTTCGAAGTTAGCGCCCTCGGAGTTGGGAGCGTCGATCGATGCTCTCGCCAGCGAGAACAAGAGATCCCTGCGGCGTCACGACGACGACGATGACGACGATGATGACGAAGAAGAGAGATACAAACCAGAGAAAATCGAGAAGTTGCGAAAGGGTTACTGGGATGACTTCTTCACGAAATGGAATGGCAGAGAACACTCACCGATCAATATCGAGGATAAGTTGGATAAGTTGAAGAAAGTGCTGGACAAGAGTACACGCGATGCTATTGTCAGGAATTATCAGAACAAGTTCGTCCCCCCTAATTATTAG
Protein sequence:
MRLSNTLVVACATVLLASGHALSETVNIDQATVSKLAPSELGASIDALASENKRSLRRHDDDDDDDDDEEERYKPEKIEKLRKGYWDDFFTKWNGREHSPINIEDKLDKLKKVLDKSTRDAIVRNYQNKFVPPNY
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 15464.2 | 135 | 5.23 | -0.876 | 52.41 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG:
PRINTS: