Effector profile
PlantPEAD ID: PlantPEAD20907 Uniprot ID: C0LF24 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 67593 Pathogen type: Oomycota
Species: Phytophthora sojae Strain: P7064 Other name: Phytophthora megasperma f. sp. glycines
Gene name: Avr3c NCBI Gene ID: FJ705361
Entry name: C0LF24_PHYSO Protein name: RxLR effector protein
DOI:
Gene/Protein information
Gene sequence:
ATGCGCGTGTGCTCCGTCCTCCTAGTTGCTGCAGCTGCTCTCATCGCGACCAGTAATGCTGTTGAGCCTTCCGCCACGTCAACCGTTGAGGTTGCTGAGGTTCAAGCGCGTGGTGCAGACAAACGGTTCCTTCGTAGCCTCCAGACTGAGGAAGAGCAAGGAGACAGCGATGTCAACGAGGCAGAAGACGGTAGTGAAGAGAGAGGACTATTCGCCTGGATCAAAAACGCAGTGACTGGCGATGTTCTTCTGGCGAAGGCGAATAAAGGCGACTTCGAGATGCAGACCAAGCTCTTCAAAAAGTGGATAGAAGAAAAACCTAAAGTCCGACAAAACGCGATCGCCAAGATCATGAGGGATGGAGGACGCAAGAAATACGATACGGTGTTGACGGCGTGGATGAACCACGATAAAAGAACCGCCAATGGTATCGGCATCCGTGGCGCTACCAATGATGTTGATGAACTGCTTCCAGGAACTCTCATCTACAGGGCAGCTGCCGGAGATACGGGCGCCCAGGGCGCACTATTCAGCATTTGGATCGGCGCTGAAAAGAAAACTGTGGACACTGCGCGCATAATCCTCTCCAAATCTGAAATTTCGGCCAAAGAGTATAAGAGACTAAACAAAGCGTGGGTGCAATACCGAAGGAAACACAAGTAA
Protein sequence:
MRVCSVLLVAAAALIATSNAVEPSATSTVEVAEVQARGADKRFLRSLQTEEEQGDSDVNEAEDGSEERGLFAWIKNAVTGDVLLAKANKGDFEMQTKLFKKWIEEKPKVRQNAIAKIMRDGGRKKYDTVLTAWMNHDKRTANGIGIRGATNDVDELLPGTLIYRAAAGDTGAQGALFSIWIGAEKKTVDTARIILSKSEISAKEYKRLNKAWVQYRRKHK
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
24296.7 220 9.32 -0.444 27.8
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.