Effector profile
PlantPEAD ID: PlantPEAD21566 Uniprot ID: A0A0Q0D6W2 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. spinaceae strain ICMP16929 Other name:
Gene name: NCBI Gene ID: LJRI01000674
Entry name: A0A0Q0D6W2_PSESX Protein name: Shikimate kinase
DOI:
Gene/Protein information
Gene sequence:
CGCGACAGTGGCGCAGAGCGACGCCACCGCCGAATTCCTCTCGCAGTCCTTTGGTATCCAGTACAGCTACACAGGCTTCGACGACAGATCGGGCAGCGATGCCGAGATGTTGCACAGCAAGGGCATGCTCATCGTGGTGCCATCAAAGAACTGGCCAGCCAATTTTGCGGACATGGATCTGGCCTGCTCGAAGGAGGACCTCAAGACCTTATCGCGCTGGACGACCGGTCGCGACCGCAGTGCCGTGCCGCAGGACATGCTCAGCACCGGCAGCCTGCGGCTCAAGGACATCGTGGAGCCCGGACGCATGGGCGCACTGCCTATCCCGGAACTGCGCAAGCGCAACATGGACACCGACGGCGACGACGCGTTTGTGTACGCGGGCTACCCCAAGCTGGCCGCGCTGATTTCGCGCGAGATGGCCGATCGCGAGGTACGCCGCGGCCAGCCACGTTCCTTCAAACCGCCGAAAACGGCCACGCCGGCCATTGATCCTGACAATGGCCATTACCAGGCGGGGCGGCTGTCCGAGATCATGTCTCTGCAACGTGGCGGCCAGATCATGGGGGCGGCCAGCACCTTGGCAGCGCGCTTCATGGCGCAGCCTGACCACCTGCGTGAGGCAATGGCGCGCAATATGATGTTCGGCACTTATGACGGCATTGAGCGCGACCTGCGTAACGGTCTACGTGTAGCACTCGACGGCAAAGCCAGAGATCCTCAGGTGTTGACGGAACTGCGCAACCAGGCATACAACGCCATCGGGCGCGCCCACCTGCCCGAGGCACGTGAAGCCGCCGAGCTCCTGCATGCACAACTGCTTCGACTGGAGCCGGGGGCATCATCGCGAGCCGAAGTGCCGCCATTGCCGGATGCGCTGGGCGAGGCCTTCCCACGCCTCGCCCAGGCGTACCTTGCTGCGCCTGATCCTGAGGCACGGATTCACGCCATCATCGACAACTACCCGGTGTGCAGGCTCTCGCACGCGCAGTTCCCGGCCGGGCAACCGGGGCTCATCCCCGGCGAGCCGGAACTGAGCATGCGCAACCTCTTCACCATCGCGATCAAGGTGGGCACCGATGCGCTGAAGTCTGACACCGGCACGGCGCTGTTCGCCAAGATCGTGGAGTCGTGCGAACGATCCGAGCGAGGGTTCGCTGATCGGGTTCGCAGCGTACCGTATGGCAAGGTGACTGCTCGGGCCATGCATGATGGTCGCTTCGACGCCGAGCAGACCCAGGTGGACCTGCAGAACATGCCGACGATGGCTGCGGGCGTCATGCAAGACGCGCTACACTCGCTGCAGCAAGCAGGCCTGATCGACCCACCGCCACCGCCCGCCGAGCGCCTGCGCGCCGTGCAGCCAGAGGACATTGCGCTTGAGGCGCAGAGCTTACTGACGCGTGCTCGCGAGATGGAACCTAGGGTCACTCACATGCTGAGGCGCGTCGCCGAGTCCCATGCTGGGCAGCTGGCGGGCATGGACCATCAACTGAAGTCGGTCGGCTCGTTGAAAGAAAAGCTAACGCAGCAGATGGCTGTGAAAAACAAGACCCTGGAAGAAGCCGTGGCCGGCGTGAACGACGCGCTGCGCTACAGCGTGGTACTGGATCCGCAGCACTTCACCGCTGGCTTGCGCGGTGTGCTGGCCTCGCTGGACGATCAGGGCCATGTGCGCGTCAAGCTGAACAACCTGTTTGCCAAGCACCAGCCGGCCTTCAAAGCGGTCAATGTCACGATGCGCAGTCCTGAAGGCGCGCTCTGGGAGATCCAGTTCCACACGCCTGACACCTTCAGGCTCAAGGAGCAATTCCATGATCTTTACAAGCACAGCTATGCGCTGCAGCTTCAGGGTGCCCCACTAACTGACCAGCGAGAAGTGCAGGCGCCCGCGCAAGACGCCTTCAGACTCGTGCCTTCGCCGCCAGAGTGCGACGATATCGACGACTGGGAGGAGGAGAACGTCCCGGCCTTGGCAATCACGGTTCCGGCTTTCAAATCCCAACCAAACAATCGCAAAGACGCCGCAAAATTCCGTGCAGGCGTGAGCAGCACACCGCAAGTGGCGCTGTCACAGCAGAGGACGCCAACGCGGTTCAATGCAAACGCATCGCCAGCACAAATATTGTTCGACGTTGCCGCAAGCAAGCAAGAGTCGCTTACGCCTGTATTCAACAAGCTGGCCGACGACTTCGACGCGCGGCTCTGGGGAAACGTTCGCTACAACGCTACGGACGACCGGATCGAGCAGCTACAGAACGCACCGTTCCAAAAATCGATCGCATCGATCAAGAGCAAGATGCGGAGCCATGTGCAAGTCGGCATGACCGAGGCACAGGCAAATCAGAGCGTGGGCGATGCGCTGCGCTACGTGCTCCAGTTGCCTTCCGAAGATTTTGTTGCGAAGGTGCTAGCGGTAAATGATGTGCTGCATCGGCAAGGGATGACTTGCGTGAAGCGTAAAAATTACTTTACCACAGGAGACGGCACCTACAAGGGGATCAACGCACGCTTCACGGATGCTGAGGGATATGAGTTTGAAGTGCAGTTTCACACTGCCGACAGCTTCAAAGCCAAGGCACAAACGCACCTGCTATACAAAGAAATGCAGTTGGCACAGAACAGGCTTGAAAAGGAGCAGCAGAAAAATCCACCCAACCTCGATAGGCAGGCAAAACTGACCAACGATCTAGCAAAGTACACAAACGCAATGCGCGAGATCATGACTGCCGTGAACAAGCCTGCTCGCGTCGAGAGCCTGGATGGTCGCTCATAA
Protein sequence:
ATVAQSDATAEFLSQSFGIQYSYTGFDDRSGSDAEMLHSKGMLIVVPSKNWPANFADMDLACSKEDLKTLSRWTTGRDRSAVPQDMLSTGSLRLKDIVEPGRMGALPIPELRKRNMDTDGDDAFVYAGYPKLAALISREMADREVRRGQPRSFKPPKTATPAIDPDNGHYQAGRLSEIMSLQRGGQIMGAASTLAARFMAQPDHLREAMARNMMFGTYDGIERDLRNGLRVALDGKARDPQVLTELRNQAYNAIGRAHLPEAREAAELLHAQLLRLEPGASSRAEVPPLPDALGEAFPRLAQAYLAAPDPEARIHAIIDNYPVCRLSHAQFPAGQPGLIPGEPELSMRNLFTIAIKVGTDALKSDTGTALFAKIVESCERSERGFADRVRSVPYGKVTARAMHDGRFDAEQTQVDLQNMPTMAAGVMQDALHSLQQAGLIDPPPPPAERLRAVQPEDIALEAQSLLTRAREMEPRVTHMLRRVAESHAGQLAGMDHQLKSVGSLKEKLTQQMAVKNKTLEEAVAGVNDALRYSVVLDPQHFTAGLRGVLASLDDQGHVRVKLNNLFAKHQPAFKAVNVTMRSPEGALWEIQFHTPDTFRLKEQFHDLYKHSYALQLQGAPLTDQREVQAPAQDAFRLVPSPPECDDIDDWEEENVPALAITVPAFKSQPNNRKDAAKFRAGVSSTPQVALSQQRTPTRFNANASPAQILFDVAASKQESLTPVFNKLADDFDARLWGNVRYNATDDRIEQLQNAPFQKSIASIKSKMRSHVQVGMTEAQANQSVGDALRYVLQLPSEDFVAKVLAVNDVLHRQGMTCVKRKNYFTTGDGTYKGINARFTDAEGYEFEVQFHTADSFKAKAQTHLLYKEMQLAQNRLEKEQQKNPPNLDRQAKLTNDLAKYTNAMREIMTAVNKPARVESLDGRS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
102272 924 6.67 -0.49 43.69
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.