Effector profile
PlantPEAD ID: PlantPEAD21672 Uniprot ID: A0A1I5AQT4 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: 1188_1 Other name:
Gene name: NCBI Gene ID: RBPG01000106
Entry name: A0A1I5AQT4_PSESX Protein name: pectate lyase
DOI:
Gene/Protein information
Gene sequence:
ATGAGCATCGGTATCAACTCCTCCACCTCCTACCAACCCGCTTCAACCCAGCTGGACTTCTCGGCGCTGAGCGGCAAAAGCCCGCAGACCAATACGTTCAGCGAGGAGAGCACTGCACAGGCCGTCGACCCGAGTGCCCTGCTGTTCGACACTGCCAGCCAGAAAGACGTCAGTTTCGGAAAACCCGACAATACGGTTCAAAGCCCCACCGACAGCAGTGCTGCAACTGACCCTCAATCCAACGTCGTCAAGCTGCTCAGCGCGCTCGTCACATCGCTGCTGCAAATGCTCATGAACCTTAATAAAAAACAGGACACGGGTCAGGACGCCAACGAGTGGCAAGACCCGTTTCAAAACAATGGCGGACTCGGTACGCCATCGACCGAAGGCGGTGGCGGTGGTACTGAGGCGGCTTCAAGCGGGGACGACGGCGGAGGCGGTACTGAGGCGACTTCAGGCGGTGACGAGGGCGGCGGCGGTACAACGGCGGCGACGGGTGGTGGCGATGGTGGCGGTACATCCCCGACCACTGAAGGTGACGGCGGCGGTAGTTATGCGTCGACTGGCGCAGACGGCAGCGGCACGCCTTCGACCGAGGACGGAACCGGTGGCGGTGGCGGTGGCGGTGATGGCGTAACGCCTCAAGTCACCCCGCAACTGGCCAACCCTGGCCGCAGCTCGGGCAACGGCACGGTTTCGGATACAACGGGATCCCTTGAGCAATCCGGCAACGTCAATGTCGTGAAAGACACCATCAAAGTCGGTGCTGGCCAGGTGTTTGACGGTCACGGTGCAACCTTTACCGCCGACAAGTCGATGGGCACCGGCGACCAGGACGAACATCAGAAGCCCCTGTTCGAACTGGCCGAAGGCGCTGTGCTGAAAAACGTGAACCTGGGTGAGAACGAAGCCGACGGCATCCACGTGAATGCCAAAAACTCGGAGCAAGTCACCATTGATAACGTGCACGCCCAGAACGTCGGTGAAGACATGATCACGGTCAAGGGCGAAGGAGGCGCAAAAGTGACCAACCTGAACATCACTAACAGCAGCGCCAACGGTGCCGATGACAAGGTCATTCAGCTCAATGCCGATACCCACCTGAAAGTCGACGGTTTCAAGGCCACCGATTTCGGCACGCTGGTCCGTACCAATGGTGGCAAGCAGTTTGATGACATGAGTGTCGAGCTCAATGGCGTGGACGCAACCCACGGCAAGTTCGCACTCGTCAAAAGCGACAGTGACGATCTGAAACTGGCCACTGGCGACATCGCCATGACCGACGTCAAGCACGCCTATGACAAGACCAAGGCGTCTACCCAGCACACCGAGCTCTGA
Protein sequence:
MSIGINSSTSYQPASTQLDFSALSGKSPQTNTFSEESTAQAVDPSALLFDTASQKDVSFGKPDNTVQSPTDSSAATDPQSNVVKLLSALVTSLLQMLMNLNKKQDTGQDANEWQDPFQNNGGLGTPSTEGGGGGTEAASSGDDGGGGTEATSGGDEGGGGTTAATGGGDGGGTSPTTEGDGGGSYASTGADGSGTPSTEDGTGGGGGGGDGVTPQVTPQLANPGRSSGNGTVSDTTGSLEQSGNVNVVKDTIKVGAGQVFDGHGATFTADKSMGTGDQDEHQKPLFELAEGAVLKNVNLGENEADGIHVNAKNSEQVTIDNVHAQNVGEDMITVKGEGGAKVTNLNITNSSANGADDKVIQLNADTHLKVDGFKATDFGTLVRTNGGKQFDDMSVELNGVDATHGKFALVKSDSDDLKLATGDIAMTDVKHAYDKTKASTQHTEL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
44705.8 445 4.28 -0.587 26.7
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.