Effector profile
PlantPEAD ID: PlantPEAD21675 Uniprot ID: A0A6B2APJ1 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: P123 Other name:
Gene name: NCBI Gene ID: VLIF01000001
Entry name: A0A6B2APJ1_PSESX Protein name: pectate lyase
DOI:
Gene/Protein information
Gene sequence:
TCAGAACTCGGTGTGCTGGGTAGACGCCTTGGTCTTGTCATAGGCGTGTTTGACGTCGGTCATGGCGATGTCGCCAGTGGCCAGTTTCAGATCGTCACTGTCGCTTTTGACGAGTGCGAACTTGCCGTGGGTTGCGTCCACGCCATTGAGCTCGACACTCATGTCATCAAACTGCTTGCCACCATTGGTACGGACCAGCGTGCCGAAATCGGTGGCCTTGAAACCGTCGACTTTCAGGTGGGTATCGGCATTGAGCTGAATGACCTTGTCATCGGCACCGTTGGCGCTGCTGTTAGTGATGTTCAGGTTGGTCACTTTTGCGCCTCCTTCGCCCTTGACCGTGATCATGTCTTCACCGACGTTCTGGGCGTGCACGTTATCAATGGTGACTTGCTCCGAGTTTTTGGCATTCACGTGGATGCCGTCGGCTTCGTTCTCACCCAGGTTCACGTTTTTCAGCACAGCGCCTTCGGCCAGTTCGAACAGGGGCTTCTGATGTTCGTCCTGGTCGCCGGTGCCCATCGACTTGTCGGCGGTAAAGGTTGCACCGTGGCCGTCATACACCTGGTCAGGACCGACTTTGATGGTGTCTTTCACGACATTGACTTCGCCTGATTGCTCAAGAGAGCCCGTTGTATCCGAAACCGTGCCGTTGCCCGAGTTGCGGCCAGGGTTGGCCAGTTGCGGGGTGACTTGAGGTGTTACGCCATCACTGCCACCGCCATCGGTTCCGTCCTCGGTCGAAGGCGTGCCGCTGCCCTCTGTGCCGGTGGACGCATAGCTACCGCCGCCGTCACCTTCAGTGGTTGGGGATGTACCGCCACCATCGCCACCACCCGACGCCGCTGTTGTACCGCCGCCGTCACCGCCTGAAGTCGCCTCAGTACCGCCTCCGCCGTCGTCCCCGCTTGAAGCCGCCTCAGTACCACCGCCACCGCCTTCGGTCGATGGCGTACCGAGTCCGCCATTGTTTTGAAACGGGTCTTGCCACTCGTTGGCGTCCTGACCCGTGTCCTGTTTTTTATTAAGGTTCATGAGCATTTGCAGCAGCGATGTGACGAGCGCGCTGAGCAGCTTGACGACGTTGGATTGAGGGTCAGTTGCAGCACTGCTGTCGGTGGGGCTTTGAACCGTATTGTCGGGTTTTCCGAAACTGACGTCTTTCTGGCTGGCAGTGTCGAACAGCAGGGCACTCGGGTCGACGGCCTGTGCAGTGCTCTCCTCGCTGAACGTATTGGTCTGCGGGCTTTTGCCGCTCAGCGCCGAGAAGTCCAGCTGGGTTGAAGCGGGTTGGTAGGAGGTGGAGGAGTTGATACCGATGCTCAT
Protein sequence:
MSIGINSSTSYQPASTQLDFSALSGKSPQTNTFSEESTAQAVDPSALLFDTASQKDVSFGKPDNTVQSPTDSSAATDPQSNVVKLLSALVTSLLQMLMNLNKKQDTGQDANEWQDPFQNNGGLGTPSTEGGGGGTEAASSGDDGGGGTEATSGGDGGGTTAASGGGDGGGTSPTTEGDGGGSYASTGTEGSGTPSTEDGTDGGGSDGVTPQVTPQLANPGRNSGNGTVSDTTGSLEQSGEVNVVKDTIKVGPDQVYDGHGATFTADKSMGTGDQDEHQKPLFELAEGAVLKNVNLGENEADGIHVNAKNSEQVTIDNVHAQNVGEDMITVKGEGGAKVTNLNITNSSANGADDKVIQLNADTHLKVDGFKATDFGTLVRTNGGKQFDDMSVELNGVDATHGKFALVKSDSDDLKLATGDIAMTDVKHAYDKTKASTQHTEF
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
44699.8 441 4.25 -0.627 25.44
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.