Effector profile
PlantPEAD ID: PlantPEAD21677 Uniprot ID: A0A3M3QSH9 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 86840 Pathogen type: Bacteria
Species: Pseudomonas cannabina Strain: ICMP 15203 Other name:
Gene name: NCBI Gene ID: RBPJ01000338
Entry name: A0A3M3QSH9_PSECA Protein name: pectate lyase
DOI:
Gene/Protein information
Gene sequence:
TCAAAGTTCGGTGTGCTGGGTGGACAACTTGGTTTTATCGTAGGCATGTTTAACGTCGGTCATGGCGATGTCGCCCGTTGCCAGCTTCAGATCTTCACTGTCGCTTTTCACCAAGGCAAACTTGCCGTGGCTGGCATCTATGCCATTCAGCTCAATGCTCATGTCATTAAACTGCTTGCCGCCATTGGTGCGAACCATCGTACCGAAGTCGGTAGCCTTGAAACCGTCGACGTTCAAGTGGGTGTCAGCGTTTAGCTGGATGATCTTGTCATCTGCACCTTGGGCACTGCTGTTCTTAATGTCCAGATTAGTTACCTTTGCGCCTCCCTCGCCTTTGACGGTGATCAGGTCCTCACCAACGTTTTCGGCGTGCAGGTTATCAATAGTGACTTTAGCGTCTGTGGCGGCTTTGACGTGGATCCCGTCAGCTTCGTTCTGACCCAGGTTCACGTTTTTCAAAGTGGCGCCTTCAGCCAGCTCGAACAGAGGTTTCTGGCTCTCGCCCTGGCCTCCGTCGCCCAGCGCGTTGCTGGCAGTGAACGTCTTGCCCTGCCCATCGAAGGTCTCGCCTGCGCCTACCTTGATGGTTTGATTGACTACGACGGTGTCGCCGGAGGCTTTAGGAACTTGCACCGGGCCCGTACCGGTCGGTGCACTGCCTTTATTGGTAGGAGTAGTGCCATTGTCCGTTACGGAAGGAGTCCCGCCGCTGTCGCTGTCTGTCGCGGAACGGGTCCCGCCACCGCCGCCACCTGCTGCAGAGGTTGTATTGCCGCCGCTACCATCGCCCGTTGCAGAGGTTGTGTCACCGCCGCCACCTTCGCCCGTTGCAGAGGTTGTGTCGCCACCACCATCACCCGTCGCGTCAGGCGTACTGCCGCCACCATCATCAGCCAGCGATGTGTCTCCGCCAAGGCCGTTTTCGTTTTGAAACGGGTCCTGCCACTCGTTCGGGTCCTGAGCGGTGTCCTGATTCTTCATGGTGTTCGCAAGCATTTGTATCAAGGACATGATCAGCGCGCTGAACAACTTGACGAGGTTGGACTGGCTATCGCCGGTCTGGCTGGAATTCTGCAGATTCGGGGCAGTGTTTTCCGGTGTTCCGAAACGGACATCCTGTTGCTTGTCGCTACCGAACAGCAGGGCTTCAGCGTCCACGGCCTGGTTGTTCTGTCCTGCCAGTGTGTCTGTCTGAGGGCTTTTGCCGCTCAACGCTGAAAAGTCCAGCTGGGTTGACGCGGGTTGGTAACTTGTGGAGTTGATACCGATACTCATGGTGGCTTTACCTCGATGGGATGGACATATGAACCAGCGTCGTACTCCGGATTTACCCGCGTCGATCGCCGCGTCCTTGTGGGGTTCTATAGGTCGATGAGGACTTTGTCTTGCCGTTGCTCGAAGTGAGTGGCATCGCGCGGCTCTGGGTTCCCGTTTCCGACGGGGTTGCAGGGTGAT
Protein sequence:
MTLQPRRKREPRAARCHSLRATARQSPHRPIEPHKDAAIDAGKSGVRRWFICPSHRGKATMSIGINSTSYQPASTQLDFSALSGKSPQTDTLAGQNNQAVDAEALLFGSDKQQDVRFGTPENTAPNLQNSSQTGDSQSNLVKLFSALIMSLIQMLANTMKNQDTAQDPNEWQDPFQNENGLGGDTSLADDGGGSTPDATGDGGGDTTSATGEGGGGDTTSATGDGSGGNTTSAAGGGGGGTRSATDSDSGGTPSVTDNGTTPTNKGSAPTGTGPVQVPKASGDTVVVNQTIKVGAGETFDGQGKTFTASNALGDGGQGESQKPLFELAEGATLKNVNLGQNEADGIHVKAATDAKVTIDNLHAENVGEDLITVKGEGGAKVTNLDIKNSSAQGADDKIIQLNADTHLNVDGFKATDFGTMVRTNGGKQFNDMSIELNGIDASHGKFALVKSDSEDLKLATGDIAMTDVKHAYDKTKLSTQHTEL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
49862.2 484 4.96 -0.648 29.04
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.