Effector profile
PlantPEAD ID: PlantPEAD21689 Uniprot ID: A8E427 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 33069 Pathogen type: Bacteria
Species: Pseudomonas viridiflava Strain: DUD2.5a Other name:
Gene name: HrpW NCBI Gene ID: AY859281
Entry name: A8E427_PSEVI Protein name: pectate lyase
DOI:
Gene/Protein information
Gene sequence:
ATGTCTGATTTAACAAGCCTTTCAGGTTCGATGGGCAATCTGTCCAGCCTTCCCGGCGTGGGCGGCACGAGTATGGGCATCGGGGCGTCGCTGGCCGGTGCCGGTCAGGGCGCGCAGGGCGGCCAGTCCGCGCTGCAGGAGCTGGCCGGCATGCTGGCGGAGATGCTGCTGGGTTCCGGTTCCGGTTCAGGCTCGGGTGCAGGCGGTGGACAATCGGCCGGCAAAACCGGTCAGGGCGGACAAAGCGATCTGGACTCGCTGCTGCAGTCGCTCCAGGGCAACGGTCAGGGCGGTGACAAGCAGACCAAGGATTCCGGCGCTGCCGGCGGCGGCGAAAAGGAACTGCTGACTCAGGTCTTGATGGCCCTGTTCGAGAAGATCCTTGGCGGCTCGGATTCATCATCCGGCGCGGGCAACGGCTCTGGCGGTGGCGGAACCGGCGCCAGCAAAGATGCCGGTGCTCTCGGTCAAGGGCAGGGACTCGGCGGCACTCAGGGCGCTACGGGCGGATCGAGCACTGAGGATCTGGTCAACACGCTGATGCAGAAACTGGGTGGTGGATCGCTGGATAACTCCATTCAGCCGACTGCCGATGGCGGCGGTGAGGTGTCCCAGAACGGCAAGCTTAAAGAGCTGCTGGAAATGATCGCTCAGTTCATGGACAGCCATCCGGAGACTTTCAACCAGCCGTCTGATGCTGCGGGCAAAGGTGGTGGTGGCGGAGGCGGTGGCGGAACACCTTCCTTAGGTGGCGGTGGCGGTGGTGGCGGAACACCTTCCTTGGGCGGTGGTGGCGGAGGCGGTGGCGGAATACCTTCGGTGGGCGGCGGTGGCGGGGGTGGTGGCGGTACACCTTCCATAGGCGGTGGCGGTGGTACGCCTGCACCGACCGGCCCGACGGGAACACCTTCCCCCACCGGTCCGACCGGCACAGGCACCAGCGGCTCGGCCACTCCGGTCTCTTTCCCGACGGCCTCGGGCACGCCGACCGTCGTCAACGAGACCATCAAGGTGGGGCCTGGCGAGACGTTCGACGGCGGCGGCAAGACTTTCACCGCAGGCAAGGCGCTGGGAGATGGCGGACAGGGCGAGGGACAGAAGCCGATGTTCGAACTGGCTGAGGGCGCCACCCTGAAAAACGTGGTGTTGGGTGACAACGCTGCCGACGGTGTGCATGTCCGTGCTGCCAGCGAAAAAGCCGTGAACGTGGATAACGTCCATTGGACCAACGTCGGCGAAGACGCGCTGACCGTGAAGGGTGAGGGCGGTGCCAAGGTCACCAACCTGAACATCACCAACAGCAGTGCCCAGGGCGCCAATGACAAGGTGTTCCAGCTCAACGCCGATGCGAACGTGAACGTGGACAACTTCAAGGTCAAGGATTTCGGCACCTTCATGCGCACCAATGGCGGGCAGCAGGGTGACTGGAACCTGGACCTGAAAAACATCAGCGCTGAAGACGGCAAGTTCTCCTTCGTGAAAAGTGACAGCGAAGGCCTGAACCTGACCACCAGCGGCATTGATCTGAAGAACGTCGAGAACGCCTACAGCAAGCTGCCAGGCTCGACCAACCATAAGGAGGCTTGA
Protein sequence:
MSDLTSLSGSMGNLSSLPGVGGTSMGIGASLAGAGQGAQGGQSALQELAGMLAEMLLGSGSGSGSGAGGGQSAGKTGQGGQSDLDSLLQSLQGNGQGGDKQTKDSGAAGGGEKELLTQVLMALFEKILGGSDSSSGAGNGSGGGGTGASKDAGALGQGQGLGGTQGATGGSSTEDLVNTLMQKLGGGSLDNSIQPTADGGGEVSQNGKLKELLEMIAQFMDSHPETFNQPSDAAGKGGGGGGGGGTPSLGGGGGGGGTPSLGGGGGGGGGIPSVGGGGGGGGGTPSIGGGGGTPAPTGPTGTPSPTGPTGTGTSGSATPVSFPTASGTPTVVNETIKVGPGETFDGGGKTFTAGKALGDGGQGEGQKPMFELAEGATLKNVVLGDNAADGVHVRAASEKAVNVDNVHWTNVGEDALTVKGEGGAKVTNLNITNSSAQGANDKVFQLNADANVNVDNFKVKDFGTFMRTNGGQQGDWNLDLKNISAEDGKFSFVKSDSEGLNLTTSGIDLKNVENAYSKLPGSTNHKEA
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
50253.5 528 4.56 -0.376 29.46
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.