Effector profile
| PlantPEAD ID: PlantPEAD21713 | Uniprot ID: A0A0W8CB90 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 4790 | Pathogen type: Oomycota |
| Species: Phytophthora nicotianae | Strain: race 1 | Other name: Brown rot and root rot of citrus agent, buckeye rot agent, pineapple heart rot agent, pistachio foot rot agent, sesame blight agent |
| Gene name: | NCBI Gene ID: LNFP01003361 | |
| Entry name: A0A0W8CB90_PHYNI | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGTCAAGTCCTTCGCGTCGTTCGTGACGTCTGCCGCTCTCCTCCTTGCGGTTGCCACCTCCGCTTCTTTGCCGAATGGGTCGTGGCCCGCCAGCAAGGGCACCGTGCAGTACTCGCAGGCCTACATCGTCAAGGCCGGTGAGGTCTTCGACGGCAAGATGAAGACGTTCGAGCGCTCCGACGTGTCGTGCGAGGGCCAAACCGAAAGCGGATCGGACACGGCGGTGTTCAAAGTGGAGGCCGGCGGCCACCTCAAGAATGTCATCATCGGCAAGAACCAAATGGAGGGCGTGCACTGCGACAAGCATGACTGCATTATCGAAAACGTGTGGTGGGATGATGTGTGCGAGGACGCTCTCAGTGTCAAGGGCGGAACTGCGTCCAGTGTGACCAAGGTCATCGGTGGCGGTGCCCGTTACGCCGACGATAAGGTCATCCAGCACAACGGCTTCGGGCCAGAAGGACACGCCGTCTTCCTCGTGGAGGCCGGCGGCACTCTGAAGAACGCCATCATCGGCAAGAACCAGAAAGAGGGCGTGCACTGCGATGACCACGACTGCACCATCGAGAACGTCTGGTGGGACGACGTGTGCGAGGACGCGCTGAGCATCAAGGGCGGCTCGGCGTCCAGTGTGACCACCGTGACCAACTGCGGCGCTCGCTACGCCGAGGACAAGGTGGTGCAGCACAACGGCTACGGCACCGTCAAGATCAAGGGTTTCTTCGCGCAGGAGTTCGGCAAGCTCTACCGTTCGTGTGGCACGTGCGGCAACATCCCTCGTAAGGTTACGGTGGAGAACGTGTACGCCATCGACCCGCTCGTGAGCGTCGTCACCGTCAACAAGAACAACAACGACCAGGCCACGTTCAAGAACATCTACGTCAAGACGACGGACGGCAAGAAGAACGTCAAGGTGTGCCAGTGGTCGCAGGCCAGCAAGACGCCGTCGAACCTGGGCGACGGGCCGTCGGGCAAGTTGTGCCAGTACTCATCGAGTGACGTGCATATCAACGAGGATTGA
Protein sequence:
MVKSFASFVTSAALLLAVATSASLPNGSWPASKGTVQYSQAYIVKAGEVFDGKMKTFERSDVSCEGQTESGSDTAVFKVEAGGHLKNVIIGKNQMEGVHCDKHDCIIENVWWDDVCEDALSVKGGTASSVTKVIGGGARYADDKVIQHNGFGPEGHAVFLVEAGGTLKNAIIGKNQKEGVHCDDHDCTIENVWWDDVCEDALSIKGGSASSVTTVTNCGARYAEDKVVQHNGYGTVKIKGFFAQEFGKLYRSCGTCGNIPRKVTVENVYAIDPLVSVVTVNKNNNDQATFKNIYVKTTDGKKNVKVCQWSQASKTPSNLGDGPSGKLCQYSSSDVHINED
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 36382.7 | 340 | 5.86 | -0.299 | 23.88 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: