Effector profile
PlantPEAD ID: PlantPEAD21721 Uniprot ID: A0A0W8CM00 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 4790 Pathogen type: Oomycota
Species: Phytophthora nicotianae Strain: race 1 Other name: Brown rot and root rot of citrus agent, buckeye rot agent, pineapple heart rot agent, pistachio foot rot agent, sesame blight agent
Gene name: NCBI Gene ID: LNFP01001717
Entry name: A0A0W8CM00_PHYNI Protein name: Probable pectate lyase F
DOI:
Gene/Protein information
Gene sequence:
ATGGTCAAGTCCTTTGTGCCGTTCGCGACTCTTCTCCTTGCGACGGCATCCGCCGCCTCCGTACCCGATGGTACGTGGCCCACGAGCACCGGAACCGTCCAATACGCCGAAGCCTACATTATCAAGGCTGGTGAAGTATTCGACGGCAAGATGCAGACGTTCGAGCGCTCCGACGTCTCGTGTGAGGGTCAAACCGAGAGTGGAGCCGACACCGCCGTGTTCAAGATGGAGCCCGGTGCCACACTCAAGAACGCCATCATCGGCAAGAACCAAATGGAGGGCGTCCACTGCGACAAGCACGACTGCACCATTGAGAATGTTTGGTGGGACGACGTGTGCGAGGACGCCCTCAGTATCAAGGGCGGAACCGCCTCCAGTGTGTCGACTGTCACCGGTGGCGGTGCTCGCTCGGCCGACGACAAGGTCATCCAGCACAACGGATACGGCACCGTCAAGATCGACGGCTTCTACGGCGAAGATATCAGCAAGCTCTACCGTTCGTGTGGCACTTGTGGCGACCGGCCTAAGAAGGTGTCGGTCTCCAATGTGTACGTCGTGAACCCGGGCAATGCAATCGTAACGGTGAACAAGAACTGGAACGACGAGGCCACGCTGAGCAACATTTGGGTCAAGTCCAGCAACGACAAGGTGAAGATCTGCCAGTGGTCTCAGGGTAATGCGGACGGCGAGCCGTCCATGTTGGGCGACGGCGACTGGCACCTCGACGTCGAACTCGTCGTCGTCCACCGAGACGCAGTCCTCCTCCACTGGATCAGCAGCTACACAGACGACCATCTCGACTGCCTCGTCACAGGAATCTGCACCGTCGGCCTCGACCCCTACCAACTCGTCCACAGCAGCTTCGGACTCGAACGTCCCGGCACGGTGGCGCCGGCCGGCAGCAACAGTAACTCGGAGCAGACTTCGGTCAGCACGGAGTCCAGCCAGACGCAGCAGAACGAGACCAGCGACGAGTCTAATGACGAAACCACGCAGACACAGCAGTCGACCACGTCCAGCAACAAGAACGGCGACAGCGATGATGCCCAGAACGAAGAGCAGACGATCACTGCCAGTGGCAATGGCAGCACCACCTCGGACGCCGGCACGTCCACCACCGAAAGCTCGACCGCCGGTTCGACTACCCAGGCTTCCAGTGATGACTCCACGACCCAGAACTCCAGCGCCGGCTCAACTACGCAGAGCTCCGGTACTGGATCCACCGCTCAGACGTCCACCAACTCCTCAACCTCTACGTCAACAGGTTCAGTACCCGATGGCACGTGGCCTGCCAGCACTGGAACTGTTCAGTACACGGAGCCGCACACCATCAAGGCCGGCGAGGTCTTTGACGGCAAGATGCAGACCTTCGAGCGTTCCGACATCACGTGTTCGGGCGGCGAGGGACAGAAGGACACGGCCGTATTCCTCGTCGAGGCTGGTGGCACTCTCAAGAACGCCATCATCGGCAAGAATCAAAAGGAAGGTGTGCACTGCGATGACCACGACTGCACCATTGAGAACGTGTGGTGGGACGACGTGTGCGAGGACGCTTTGAGCATCAAGGGCGGGACCGCCTCTAGTGTGACCACCGTCACGAACTGCGGCGCTCGCTATGCCTCGGACAAGGTGGTCCAGCACAACGGATACGGCACCGTCAAGATCGACGGCTTTTTCGCCCAGGAGTTCGGCAAGCTGTACCGTTCGTGCGGCACGTGTGGTGACATTCCCCGTACTGTGACGGTGGACAACGTGTACGCCATCGATCCGCTGGTGAGTGTCATTACCGTGAACAAGAACTATGGCGACCAGGCCAAGCTGAGTAACATCCACGTGAAGACGACGAACGGCAACAACGATGTGAAGGTGTGTCAGTGGTCGCAGGGCGGCAGTTCGCCGTCGAACCTGGGCGACGGTCCGTCGGGTACGCTGTGCCAGTACTCGGAGAGCGATGTCCACATCAACGAGTAA
Protein sequence:
MVKSFVPFATLLLATASAASVPDGTWPTSTGTVQYAEAYIIKAGEVFDGKMQTFERSDVSCEGQTESGADTAVFKMEPGATLKNAIIGKNQMEGVHCDKHDCTIENVWWDDVCEDALSIKGGTASSVSTVTGGGARSADDKVIQHNGYGTVKIDGFYGEDISKLYRSCGTCGDRPKKVSVSNVYVVNPGNAIVTVNKNWNDEATLSNIWVKSSNDKVKICQWSQGNADGEPSMLGDGDWHLDVELVVVHRDAVLLHWISSYTDDHLDCLVTGICTVGLDPYQLVHSSFGLERPGTVAPAGSNSNSEQTSVSTESSQTQQNETSDESNDETTQTQQSTTSSNKNGDSDDAQNEEQTITASGNGSTTSDAGTSTTESSTAGSTTQASSDDSTTQNSSAGSTTQSSGTGSTAQTSTNSSTSTSTGSVPDGTWPASTGTVQYTEPHTIKAGEVFDGKMQTFERSDITCSGGEGQKDTAVFLVEAGGTLKNAIIGKNQKEGVHCDDHDCTIENVWWDDVCEDALSIKGGTASSVTTVTNCGARYASDKVVQHNGYGTVKIDGFFAQEFGKLYRSCGTCGDIPRTVTVDNVYAIDPLVSVITVNKNYGDQAKLSNIHVKTTNGNNDVKVCQWSQGGSSPSNLGDGPSGTLCQYSESDVHINE
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
69233 656 4.5 -0.502 28.21
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.