Effector profile
| PlantPEAD ID: PlantPEAD21744 | Uniprot ID: A0A080ZT54 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 4792 | Pathogen type: Oomycota |
| Species: Phytophthora parasitica | Strain: P1976 | Other name: Brown rot and root rot of citrus agent, buckeye rot agent, pineapple heart rot agent, pistachio foot rot agent, sesame blight agent |
| Gene name: | NCBI Gene ID: ANJA01002483 | |
| Entry name: A0A080ZT54_PHYPR | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
CGAGCGGTAGAGCTTGCCGAAGTCCTGTGCGTAGAAACCCTCGATGGAGACCGTGCCCAGGCCGTTGTGCTGGATGACCTTGTCGTCGGCCGAGCGCGCGCCACCGCCGATCACCTTGGTCACGCTGCTGGCCGAGCCGCCCTTGATGCTCAGCGCGTCCTCGCACACGTCCTCCCACCACACGTTCTGGATCGTGCAGCCGCTCTGCTCGCAGTGCACACCCTCCATTTGGTCCTTGCCGATGATCACGTTCTTGAGCGTGGCACCGGGCTCCACCATGAACACGGCCGTCTGCCACCCGCTCTCCTTCTGGCCGCCGCACTTGACGTTCGAGCGCGCGTACGTCTTCATGCCACCGTCGAACGTCTGGCCCTTCTTGACCGTGTACGGCTCCTTGAGGTAGACTGTGCCCTTGCTGGCTGGCCACGACCCGGTGGGCATGGGGGCGGCCTCCGAGCGCATGGAGGCTCCCGACGCGACGGCGGCCACGGCAGCGAGCGCGACAGTGAAAACGGAGACGACGTTGACCAT
Protein sequence:
MVNVVSVFTVALAAVAAVASGASMRSEAAPMPTGSWPASKGTVYLKEPYTVKKGQTFDGGMKTYARSNVKCGGQKESGWQTAVFMVEPGATLKNVIIGKDQMEGVHCEQSGCTIQNVWWEDVCEDALSIKGGSASSVTKVIGGGARSADDKVIQHNGLGTVSIEGFYAQDFGKLYRS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18622.1 | 177 | 7.63 | -0.101 | 38.66 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: