Effector profile
| PlantPEAD ID: PlantPEAD21794 | Uniprot ID: A0A8T1VUK2 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 221518 | Pathogen type: Oomycota |
| Species: Phytophthora pseudosyringae | Strain: SCRP734 | Other name: |
| Gene name: | NCBI Gene ID: JAGDFM010000170 | |
| Entry name: A0A8T1VUK2_9STRA | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAATACCTACCAGCGCTCTGACGTCAAGTGCACGGGCCAGTCGGAGGGCGGCTGGAAGGACGCCGTCTTCAAGCTCGAGGCCGGCGCCAAGCTCAAGAACGTCATCATCGGCCCCGACCAGCGTGAGGGCGTGCACTGCGACGACTCCGACTGCACCGTCGAGAACGTCTGGTGGGACGACGTCTGCGAGGACGCGCTGAGCATCAAGGGCGGCAACAAGAACAGCGTCACCAACGTGCTCGCGTGCGGCGCCAGGAACGCCGACGACAAGGTCATCCAGCACAACGGCTACGGCTACGTCAACATCAACGGTTTTTACGGAGAGAACTTCGGCGAGCTCTACCGCTCGTGCGGCACGTGCGGCAGGGGCATCAAGCGTACCGTATCGCTCAACCACGTGTGGGGAAACCCCAAGGTGAGCCTTGTGACTGTGAACGCCAACAACGGCGACATCGCCACCTTCACGAACGACATCCACGTGCACACGAGCAAGGGCACCAGCGCCGTGTGCCAGACCGCGACGTCCACGAACGACAAGGAGCCCAAGGTCACGAGCAAGGGCCTGTCCAAGAACTGCGTCTTCAACAAGGACAAGATCGAGTTCTACTAG
Protein sequence:
MNTYQRSDVKCTGQSEGGWKDAVFKLEAGAKLKNVIIGPDQREGVHCDDSDCTVENVWWDDVCEDALSIKGGNKNSVTNVLACGARNADDKVIQHNGYGYVNINGFYGENFGELYRSCGTCGRGIKRTVSLNHVWGNPKVSLVTVNANNGDIATFTNDIHVHTSKGTSAVCQTATSTNDKEPKVTSKGLSKNCVFNKDKIEFY
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 22123.6 | 203 | 6.51 | -0.544 | 20.74 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898
Pfam: PF03211
SMART:
KEGG:
PRINTS: