Effector profile
PlantPEAD ID: PlantPEAD21805 Uniprot ID: A0A6A3IAJ6 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 129364 Pathogen type: Oomycota
Species: Phytophthora rubi Strain: SCRP249 Other name:
Gene name: NCBI Gene ID: QXFV01003397
Entry name: A0A6A3IAJ6_9STRA Protein name: Probable pectate lyase F
DOI:
Gene/Protein information
Gene sequence:
ATGGTCAAGATTCGGACCGCCACGGTTGCCTCGATGGTGGTGCTGCTCAGCACCACCCTCAGCGCGGCTTTAGCAGAAGACACGTGGGGTGACGCGGCACAATACAGCAGTGGCAACTCTGTCACCCAGCCAAAAACCGAGTCGTCTGAAAAGGACAAGAACTCGGACACACCTTCGAGTTCTTGGACCCAAGCGCCGTCTACGGAGGGATCAGGCAAAAACGCTGCCAACTCGTGGAAGCAGGGCTCCGGAAACTATTGGAGCCAAGGTCCTACCGCATCGTGGGGATCGAGCAAAAAGTCTGATGGTGACAACAAGAACGACGGCGACAACCAATCCGATAACTCTTCAAATGGTGCTACCCAGGCCCCCACCACGTCCGAGTCGAGTGGAAAGTCGGGCGATGACAAGAATGACGTTGGATCATCAAAGTCAAGTAAGACGTCCGAGTCAAACGAGGACTCGTGGAAGCAAGAGGCTATCACGTTTTCTACTGTCGGCAGCAAGACGTCTGAGACCACGACACCTACGTCGTCGTCCGAGTCTAGTGCGACCGATGAAGGTAGCGATGCCACTACTCCTGCAACGTCTTCAGCCGGTAGCCAAACCACCGGCGGCGGCAGCAGCACCACGCCTTCCACCAGTGGCGGATCTGTCCCGGACGGCACTTGGCCCACCAGCGCCGGTGTCGTCCAGTTCGCCGAGGCCCGCATCATCAAGGCCGGCGAGGTGTTTGACGGCAAGATGAAGACGTACGAGCGCTCCGACGTCACGTGCCAGGGCCAGAGCGAGAGCGGCGCCTCCACGGCCGTCTTCAAGATGGAGCCCGGCTCCACGCTCAAGAACGTCATCATCGGCAAGAACCAAATGGAGGGCGTCCACTGCGACAAGCACGACTGTACCATTGAGAACGTGTGGTGGGACGACGTGTGCGAGGACGCGCTGAGCGTCAAGGGCGGCACTCCTACCAGTGTGACGACGGTCACGGGCGGTGGCGCTCGCTCGGCCGACGACAAGGTCATCCAGCACAACGGCTTCGGTACCGTCAAGATCGACGGCTTCTACGGCGAGGACATCAGCAAGCTCTACCGCTCGTGCGGCACGTGCGGCGACAAGCAGCGCAAGGTGTCGGTGACGAACGTGTACATCGTGAACCCGGACAACGCCGTCGTGACGGTGAACAAGAACTGGAAGGACGAGGCCACGCTGAGCAACATTTGGGTCAAGTCTGCCGGCAAGAAGAAGGTGAAGATCTGTCAGTGGTCTCAGGGCAACGCCGACGGCGAGCCGTCGATGCTGGGCGATGGTCCGTCTCCTCCTCTGTGTCAGTACTCGGAGAGCGACATCCACATCAACGGAGACGTGTCCAAGGCTGGCGGTTCGACACCGAGTCAGGGATCGACTCCTTCTACCCCTTCGGACGGCAGCAGTACCTCTCAGAACGAGCCGGCTACTTCTGTCGCATCTAGCGACGAAGGTGAAAGTGGTGGCGATGTCCCCGTTGAGTCTTCTGCTGGTAGCCAGACGTCTGTGTCGGAAACGCCGACTACCGAGTCGAGCGCCGGTGGTGATGAAAGCAGTGCCGATGATACGAGTGTTTCCAAGGGTGGAGACGACGGTGCTGACACTACGACCGGCAGCGAGACTTCTGATGGCCAAACTACTCAGGGATCGTCTACCTCGGGAGGCAGCCAAACCTCTCAGACTACCATTTCAACTTCGAACGGAACTCTTCCGGATGGCACGTGGCCCACCAGCACGGGAGCAGTCAAGTTCACGAAGCCGCGCGTCATCAAGTCCGGTGAGGTCTTCGATGGCAAGATGCAGACGTTTGACCGTTCCGACATCACCTGTACCGGCGGTGAGGGCCAGAAGGACACCGCCGTGTTCCTCGTCGAGGCTGGCGGCACCCTCAAGAACGCCATCATCGGCAAGAACCAGAAGGAGGGCGTGCACTGCGACGACCACGACTGTACCATTGAGAACGTGTGGTGGGATGATGTGTGCGAGGACGCGCTGAGCATCAAGGGCGGTACTGCTTCCAGCGTCACCACCGTGACGAACTGTGGTGCGCGTTCCGCTTCGGACAAGGTCGTGCAGCACAACGGCTACGGTACCGTCAACATCGACGGCTTCTACGCTGAAACCTTCGGCAAGCTCTACCGCTCGTGCGGTACGTGCGGAGACATTCCTCGCATTGTGACGCTGAAGAACGTGTACGCGGTGGACCCGCTTGTTAGCGTCGTTACGGTGAACAAGAACTACGGCGACAAGGCCACTCTGAGCAACATTTGGGTGAAGAGTTCCAAGGGGAAGGACTTGAAGGTGTGCCAGTGGTCGCAGGGCAGCAAGACCCCGACCAACGTCGGCGACGGACCGTCACCACCTCTGTGTCAGTACACGGACAGCGACATCCACATCAACCAGGACATTTCTCAAGCTGGAGCCTCGAGTCCGAGCAAGCCGTCTGGCCCGACCGAGCCTTCTGCTCCGACCAAGCCTTCGGACGGCAGCAGCACTTCTGAAACCCAGTACACCGAAGCTCCTGCCACATCATCGGAGTCAAGCGACGACGTTGCCGGAAGTGACGATGCCGGAAGTGACGAAAGCATTGCGGACGCCCCTGCAACGTCTTCGGGTGGCAGCCAGACGTCCGAGACCACGACACCTACATCGTCGTCCGAGTCTAGTGCGACCGATGAAGGCAGCGAACCTGCAACGTCTTCGGGTGGTAGCCAGACCTCTGAGACCACGACACCTACGTCGTCGTCCGAGTCTAGCGCGACCGATGAAGGTAGCGATGCCACTACTCCTGCATCGTCTTCAGCCGGTAGCCAAACCACCGGCGGCGGCAGCAGCAGCACGCCTTCCACCAGTGGCGGAACCGTCCCGGACGGCACTTGGCCCACCAGCGCCGGTGTCGTCCAGTTCGCTGAGGCCCACATCATCAAGGCCGGCGAGGTGTTCGACGGCAAGATGAAGACGTACGAGCGCTCCGACGTCACGTGCCAGGGCCAGAGCGAGAGCGGCGCCTCCACGGCCGTCTTCAAGATGGAGCCCGGCTCCACGCTCAAGAACGTCATCATCGGCAAGAACCAAATGGAGGGCGTCCACTGCGACAAGCACGACTGTACCATTGAGAACGTGTGGTGGGACGACGTGTGCGAGGACGCGCTGAGCGTCAAGGGCGGCACTCCTACCAGTGTGACGACGGTCACGGGCGGTGGCGCTCGCTCGGCCGACGACAAGGTCATCCAGCACAACGGCTTCGGTACCGTCAAGATCGACGGCTTCTACGGCGAGGACATCAGCAAGCTCTACCGCTCGTGCGGCACGTGCGGCGACAAGCAGCGCAAGGTGTCGGTGACGAACGTGTACATCGTGAACCCGGACAACGCCGTCGTGACGGTGAACAAGAACTGGAAGGACGAGGCCACGCTGAGCAACATTTGGGTCAAGTCTGCCGGCAAGAAGAAGGTGAAGATCTGTCAGTGGTCTCAGGGCAACGCCGACGGCGAGCCGTCGATGCTGGGCGACGGTCCGTCTCCTCCTCTGTGTCAGTACTCGGAGAGCGACATTCACATCAACGGAGACGTGTCCAAGGCTGGCGGTTCGACGCCGAGCCAAGGATCGACCCCTTCTACGCCGTCGGAGGGCAGTGACTCGGAGCAACTGCCGGGCACGGTGTCCCCGGATTCTCCTGACCAATCGAGTGGTAACAACGATGAAAGCAGCAGCAGCCAGTCTCAGACTGAGTCGACTGAATCGCCTGCTACTTCTTCGGAGAGTGGCGTCGACGGTGGAGACGACAACACCGACACTAAGACTTGGAGTCAAGCCGCTTCCAAGACGAGCGACGATAACAATGGTGACAAGCAGAAGACTTCGTCGAAGTCATCAAATGGCGACAACAAGGAGGAAGAGTCATCGTCGGAGACATCGGGCGGCGACAAGAAGTCGGACAACACGGAATCGGACTCGACGCAGCAGCAGGAGATCGGTGACGAGAGCGTCATGCAGTCGGAGGTGGGTGGTGAGGCTGACCCCACCGCAGTGAAGTCGGACTCTGCTACCAAGGAGTCCATGTTCATGTCGACTACTACTACTTCTACCTCGAAGTGCAACATCCGCCGCAGGAGGAACTAA
Protein sequence:
MVKIRTATVASMVVLLSTTLSAALAEDTWGDAAQYSSGNSVTQPKTESSEKDKNSDTPSSSWTQAPSTEGSGKNAANSWKQGSGNYWSQGPTASWGSSKKSDGDNKNDGDNQSDNSSNGATQAPTTSESSGKSGDDKNDVGSSKSSKTSESNEDSWKQEAITFSTVGSKTSETTTPTSSSESSATDEGSDATTPATSSAGSQTTGGGSSTTPSTSGGSVPDGTWPTSAGVVQFAEARIIKAGEVFDGKMKTYERSDVTCQGQSESGASTAVFKMEPGSTLKNVIIGKNQMEGVHCDKHDCTIENVWWDDVCEDALSVKGGTPTSVTTVTGGGARSADDKVIQHNGFGTVKIDGFYGEDISKLYRSCGTCGDKQRKVSVTNVYIVNPDNAVVTVNKNWKDEATLSNIWVKSAGKKKVKICQWSQGNADGEPSMLGDGPSPPLCQYSESDIHINGDVSKAGGSTPSQGSTPSTPSDGSSTSQNEPATSVASSDEGESGGDVPVESSAGSQTSVSETPTTESSAGGDESSADDTSVSKGGDDGADTTTGSETSDGQTTQGSSTSGGSQTSQTTISTSNGTLPDGTWPTSTGAVKFTKPRVIKSGEVFDGKMQTFDRSDITCTGGEGQKDTAVFLVEAGGTLKNAIIGKNQKEGVHCDDHDCTIENVWWDDVCEDALSIKGGTASSVTTVTNCGARSASDKVVQHNGYGTVNIDGFYAETFGKLYRSCGTCGDIPRIVTLKNVYAVDPLVSVVTVNKNYGDKATLSNIWVKSSKGKDLKVCQWSQGSKTPTNVGDGPSPPLCQYTDSDIHINQDISQAGASSPSKPSGPTEPSAPTKPSDGSSTSETQYTEAPATSSESSDDVAGSDDAGSDESIADAPATSSGGSQTSETTTPTSSSESSATDEGSEPATSSGGSQTSETTTPTSSSESSATDEGSDATTPASSSAGSQTTGGGSSSTPSTSGGTVPDGTWPTSAGVVQFAEAHIIKAGEVFDGKMKTYERSDVTCQGQSESGASTAVFKMEPGSTLKNVIIGKNQMEGVHCDKHDCTIENVWWDDVCEDALSVKGGTPTSVTTVTGGGARSADDKVIQHNGFGTVKIDGFYGEDISKLYRSCGTCGDKQRKVSVTNVYIVNPDNAVVTVNKNWKDEATLSNIWVKSAGKKKVKICQWSQGNADGEPSMLGDGPSPPLCQYSESDIHINGDVSKAGGSTPSQGSTPSTPSEGSDSEQLPGTVSPDSPDQSSGNNDESSSSQSQTESTESPATSSESGVDGGDDNTDTKTWSQAASKTSDDNNGDKQKTSSKSSNGDNKEEESSSETSGGDKKSDNTESDSTQQQEIGDESVMQSEVGGEADPTAVKSDSATKESMFMSTTTTSTSKCNIRRRRN
Protein structure:
NONE
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
142230 1381 4.48 -0.778 43.37
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.