Effector profile
PlantPEAD ID: PlantPEAD21856 Uniprot ID: A0A6G0R9C6 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 53985 Pathogen type: Oomycota
Species: Phytophthora fragariae Strain: Other name:
Gene name: NCBI Gene ID: QXFY01001205
Entry name: A0A6G0R9C6_9STRA Protein name: Probable pectate lyase F
DOI:
Gene/Protein information
Gene sequence:
TCAGTTGCGCTTGCGCCCATTGCACTTCGTATCCGTCGACGTGGCAGTGGTAACGGAAGGTGTGGAGGTCGAGATATCAATGGCCGATGTGTCAGCCTCCTCGCCAATTTCAGAAGACGCGGGAGTTGCAGTGGTGCCACCGCTGGAAGTCGAAGAAGTCTCTGCCTCTTCTTGCTCCGTGGGCGCCGACTGAGCACTCGTATCCTTGCTTGCATCCAAAGACCCCGCAGCCGCCGAAGCAGCAACGCTGGTTTCGGTACCCGCGCTAGACACCAGATCGCTGCTGGCGCTTGTACTACTCGTGGTGGATGCCACAGGGCTCGAGGTGGAGGAGCCGGTCGTAGATGCAACGTTGCTCGAGACGGATGATTTAGTCGTTGAAGACGTTGAGGTGGTGGTAGTGTTCGACGAAGTGGTGGAGGCCGTCGAAACGTCCTCATTGACATGGATATCGCTCTCCGAGTACTGACACAGAGGGTCCTTGATACCGTCGCCAAGGTCCGTCGGCTCACCGTCTGCGTTGCCCTCGGACCAACCACAGATCACGTAGCTATCATCGTCCGATGAGATGTAGATGTTGCTCAGCGTAGCCTCATCGTTGTAGTTCTCGTTCACCGTGACGATGCTCACGCCCGGGTTCACCGCGTACACGTTCGACACATTCACGAACCGCTGCTTGTCGCCACAAGTGCCGCACGAACGGTACAGCTTGCCGAACGTGTCGGCGTAGAAGCCGTCGATCTTGACGGTACCGTAGCCGTTGTGCTGGATCACCTTGTCGTCGGCGTTGCGTGCACCGCCGCCCGTGACCGTGGAGACACTGGAAGCCGACCCGCCCTTGATACTCAGTGCGTCCTCACAGACATCGTCCCACCAGACGTTCTCGATGGTGCAGTCGCTGTCGTCGCAGTGGACGCCTTCCATTTGGTCGGCGCCGATGATGACGTTCTTGAGGGTGCCGCCGGCCTCGACGAGGAACACGGCGGTCGACGAGCCACTCTCGGTCTGACCCTCGCACGTGATGTCCGAGCGCTGGTAGGTCTTGAGACCACCGTCGAAGGTCTCTCCGGCAGCGACGGTGTAGGCCTCCGTGTAGTAGACATCGCCCTGGCTGGTGGGCCAAGTTCCATCGGGGACGGAGGCGGCCGAAGCGGTACCGACGGCGAGGGCGATGATAGAGAGGACCTTGACCAT
Protein sequence:
MVKVLSIIALAVGTASAASVPDGTWPTSQGDVYYTEAYTVAAGETFDGGLKTYQRSDITCEGQTESGSSTAVFLVEAGGTLKNVIIGADQMEGVHCDDSDCTIENVWWDDVCEDALSIKGGSASSVSTVTGGGARNADDKVIQHNGYGTVKIDGFYADTFGKLYRSCGTCGDKQRFVNVSNVYAVNPGVSIVTVNENYNDEATLSNIYISSDDDSYVICGWSEGNADGEPTDLGDGIKDPLCQYSESDIHVNEDVSTASTTSSNTTTTSTSSTTKSSVSSNVASTTGSSTSSPVASTTSSTSASSDLVSSAGTETSVAASAAAGSLDASKDTSAQSAPTEQEEAETSSTSSGGTTATPASSEIGEEADTSAIDISTSTPSVTTATSTDTKCNGRKRN
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
40493.2 397 4.05 -0.339 33.83
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.