Effector profile
| PlantPEAD ID: PlantPEAD21857 | Uniprot ID: A0A833SU28 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 4787 | Pathogen type: Oomycota |
| Species: Phytophthora infestans | Strain: KR_1_A1 | Other name: Potato late blight agent, Botrytis infestan |
| Gene name: | NCBI Gene ID: WSZM01001043 | |
| Entry name: A0A833SU28_PHYIN | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTGGACCACAGCGTGCCTGACGGACCATACGCCCACGTTCGATGGCGAGGTCTTTGACGGCAAGATGCAGACCTTCGAGCGCTCGGACATCACGTGCTCGGGTGGCGAGGGCCAAAAGGACACGGCTGTGTTCCTCGTCGAGGCCGGTGGTACTCTTAAGAACGCTATCATCGGAAAGAACCAGAAGGAGGGTGATCACTGTGATGACCATGACTGTACCATTGAGAACGTTTGGTGGGACGACGTGTGCGAGGACGCGCTGAGCGTTAAGGGCGGAACCGCCTCCAGTGTCACCACCCACAACGGCTACGGCACCGTCAAGATCGACGGCTTTTTCGCCCAGGAGTTCGGCAAGCTGTACCGTTCGTGCGGCACATGCGGTGACATTCCCCGCACGGTGACGGTGGACAACGTGTACGCTATCGACCCACTCGTGAGTGTCATCACCGTGAACAAGAACTACGGCGACCAGGCGAAGCTGAGCAACATCCACGTGAAGACGACGAACGGCAACACCGGTGTGAAGGTGTGTCAGTGGTCGCAGGGCGGCAGCTCACCGTCGAACCTGGGCGACGGTCCGTCAGGCACGCTGTGCCAGTACTCGGAGAGCGACGTCCACATCAACGAATAA
Protein sequence:
MWTTACLTDHTPTFDGEVFDGKMQTFERSDITCSGGEGQKDTAVFLVEAGGTLKNAIIGKNQKEGDHCDDHDCTIENVWWDDVCEDALSVKGGTASSVTTHNGYGTVKIDGFFAQEFGKLYRSCGTCGDIPRTVTVDNVYAIDPLVSVITVNKNYGDQAKLSNIHVKTTNGNTGVKVCQWSQGGSSPSNLGDGPSGTLCQYSESDVHINE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 22517.7 | 210 | 4.61 | -0.427 | 29.75 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: