Effector profile
| PlantPEAD ID: PlantPEAD21873 | Uniprot ID: A0A8J4VZ30 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 325452 | Pathogen type: Oomycota |
| Species: Phytophthora kernoviae | Strain: 00238/432 | Other name: |
| Gene name: | NCBI Gene ID: AOFI03001589 | |
| Entry name: A0A8J4VZ30_9STRA | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGACGCGTCTGGTGCTGGTACGGTAGCTCCCGCCGGTAGCTTTGAAGAATCGATTGTCGACTTTGGTTCCAGTAAGAGCACGGAGCAGGGATCCACCGACGAATCCGCCAACGCTCCATCCGCCTTAAGTTCAAGCTCGTCTGCCACGACAGATATCTCACAGACTGCCGTTCAACAATCAAGCAGCGCCTCCAGCTCTAGCAGCCCGAGCCAGTCTGCTCCGACGAACTCCACAGGCTCAGTCCCGGATGGCAAGTGGCCCACCAGTAAGGGTACCGTTCGGTACGCCCAGCCTTACACCGTCAAATCTGGCGAGATCTTCGACGGAAAGATGAAGACGTTCGAGCGATCGGACATCACTTGTGAGGGCCAGACAGAGAGCGGGTCAAAAACGGCCGTGTTCCTCGTGGAGGCCGGCGGCACTCTGAAGAACAACTACAACGACCAGGCCAAGCTGAGTAACATCCACGTGAAGTCGAGTAAGCCCAAGGTGAAGGTATGCCAATGGTCTCAGGGCGGCAGCTCTCCGAAAAACCTGGGTGATGGTCCGTCGGGTACGCTGTGTCAATATTCGGAAAGTGACATCCACATCAACGAGTAA
Protein sequence:
MDASGAGTVAPAGSFEESIVDFGSSKSTEQGSTDESANAPSALSSSSSATTDISQTAVQQSSSASSSSSPSQSAPTNSTGSVPDGKWPTSKGTVRYAQPYTVKSGEIFDGKMKTFERSDITCEGQTESGSKTAVFLVEAGGTLKNNYNDQAKLSNIHVKSSKPKVKVCQWSQGGSSPKNLGDGPSGTLCQYSESDIHINE
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20597.2 | 200 | 5.04 | -0.662 | 55.86 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: