Effector profile
| PlantPEAD ID: PlantPEAD21950 | Uniprot ID: A0A329REL0 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 29920 | Pathogen type: Oomycota |
| Species: Phytophthora cactorum | Strain: 4032 | Other name: |
| Gene name: | NCBI Gene ID: RCMI01002938 | |
| Entry name: A0A329REL0_9STRA | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAGTTGTCGTCGTCCTTCTTCTTGCTCTTCTTGTCGTCGCCTTTGTTCTTCTTTTCCTCGGTTTGCTCCGTATTCTCGTCTTGGCTCTTCTTGTCATCGCTCTGGTCCTTGTTGTCGTCCGACTTGGAGCTCTTCGTCGACGTCGACGTCGAAGTCGCGCTCGTCTCAGTCTGCTCCGTGGTGTCTTGGTTCGAGCTCCCGCGGAGCGACGTAGAAGCGCCGGTCTTCTCGTCACCCTGCGTGGTAGAACCGCTGGACGCCTGCTTGGTTGAGGTGGAGGAACCGCTGCCAGTAGTGGCAGTCGAGTTCGACGAGGTGCCGGTGGACTGCGAGACGTCTCCGTTGATGTGCACATCGCTCTCTGAGTACTGACACAGTGGTGGGGACGGTCCGTCGCCCAGCATCGAGGGCTCGCCGTTGGCGTTGCCCTGCGACCACTGGCAGATCTTGACCTTGTCACCGCTGGACTTGACCCAGATGTTGCTCAGCGTGGCCTCGTCGCCCCAGTTCTTGTTGACCGTCACGATGGCGTTGCCCGGGTTCACGACGTACACGTTCGAAACGGACACCTTCTTCGCCTTGTCGCCGCACGTGCCGCACGACCGGTAGAGCTTGCTGATGTCCTCGCCGTAGAAGCCGTCGATGTTGACGGTGCCGTAGCCGTTGTGCTGGATCACCTTGTCGTCGGCCGAGCGAGCACCGCCACCGATGACCTTGGACACACTGGAGGCGGTTCCGCCCTTGATGCTGAGGGCGTCCTCGCACACGTCGTCCCACCACACGTTCTCGATGGTGCAGTCGTGGTTGTCGCAGTGGACGCCCTCCATCTGGTTCTTGCCGATAATGACGTTCTTGAGGGTGCCGCCGGCCTCCACTTTGAACACAGCGGTGTCCGATCCGCTCTCGGTCTGGCCCTCGCACGAGACGTCGGAGCGCTCGAACGTCTGCATCTTGCCGTCGAACACCTCGCCAGCCTTGACAATCTGGGCCGTCGCGTACTGCACGGTACCCGTGCTGGTGGGCCACGTGCCGTCGGGCACGGAGGCGGCGGTCGCGACCGCAATGAGGAGGGCAGTGGACGTGGCGAAGGAAGCAAAGGACTTGACCAT
Protein sequence:
MVKSFASFATSTALLIAVATAASVPDGTWPTSTGTVQYATAQIVKAGEVFDGKMQTFERSDVSCEGQTESGSDTAVFKVEAGGTLKNVIIGKNQMEGVHCDNHDCTIENVWWDDVCEDALSIKGGTASSVSKVIGGGARSADDKVIQHNGYGTVNIDGFYGEDISKLYRSCGTCGDKAKKVSVSNVYVVNPGNAIVTVNKNWGDEATLSNIWVKSSGDKVKICQWSQGNANGEPSMLGDGPSPPLCQYSESDVHINGDVSQSTGTSSNSTATTGSGSSTSTKQASSGSTTQGDEKTGASTSLRGSSNQDTTEQTETSATSTSTSTKSSKSDDNKDQSDDKKSQDENTEQTEEKKNKGDDKKSKKKDDDN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 38678.8 | 369 | 4.77 | -0.739 | 32.41 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: