Effector profile
| PlantPEAD ID: PlantPEAD21955 | Uniprot ID: A0A329RPT5 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 29920 | Pathogen type: Oomycota |
| Species: Phytophthora cactorum | Strain: 4040 | Other name: |
| Gene name: | NCBI Gene ID: RCMK01000122 | |
| Entry name: A0A329RPT5_9STRA | Protein name: Probable pectate lyase F | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAGTTGCGGTTGCGGTTGCGGTTGCGAGTATTGCACTTGGTGTCCGTGGACGTAGCGGTGGTAACTGAGGGTGTGCTAGCAGAGCTTCCCGCGACAGACGTTTCGGCTTCTTCACCAATATTAGACGACGTCGTCGGAGCCTCCGTCGATTCAGACGCAGACGTGGTCGCTTCGTAGCTGGAGCTAGAGGAGGCAGACGTCTCGTCCTCAGAAGCCGATGGAGCACTCGTTTCCTCGCTCACGGATGAAGAAGCCGACTCAGCCGAAGCACCAACGCTAGTTTCACCGTCCAAACTCGACACAGGAGTCGAGGATTCCTCCGTGGTGGTACTGGCACTACCCGTGGTAGAAACCACAGAGCTGGAGGTAGAAGTACCAGTAGCGGACGCGCTAGCGCTAGCAATCGTAGACGTCGTCGTCGAAGTTGTCAACGTCGTGGTATTCGATGAAGTACTCGCGGCCGTCGACACGTCCTCGTTCACGTGGATGTCGCTCTCCGAGTACTGACACAGCGGATCCTTGATGCCATCGCCCAGCTCCGTAGGCTCGCCATCCTCGCTACCCTCCGACCACGCGCAAACCGCGTAGCCGTCATCGTCCGACGAGATCCAAATGTTGCTCAAGGTAGCCTCGTCGCCGTAGTTCTCGTTCACCGTCACGATGCTCACACTCGGGTTCACCGCGTATACGTTAGACACCGTCACGAAGCGCTGCCTGTCGCCACACGTTCCGCACGAGCGGTACAGCTTGCCGAACGTGTCGGCATAGAAGCCGTCGATGTTGACGGTGCCGTATCCGTTGTGCTGAATCACTTTGTCGTCGGCGTTACGAGCACCACCTCCGGTCACGGTCGACACACTGGAAGCGGAGCTGCCCTTGATACTCAGGGCATCCTCGCAGACGTCATCCCACCACACGTTCTCAATGGTGCAGTCGTGGTCGTTGCAGTGGACACCTTCCATTTGGTCGGCACCAATGATAACATTCTTGAGGGTGCCGCCGGCTTCAACGAGGAAGACGGCTGTTGACGACCCGCTTTCTTCCTGGCCCTCACACGTGATGTCCGAGCGCTGGTACGTCTTGAGACCGCCGTCGAACGTCTCACCAGCGGCGACCGTGTAAGATTCCGTGTAGTAGACGTCTCCCTGGCTCGTGGGCCACGTTCCATCCGGAACAGAAGCGGCAGAAGCGGTGGCCACAGCGAAGGCGGCAGTGGTTGCAGCAACGGTGAAGACCTTGACCAT
Protein sequence:
MVKVFTVAATTAAFAVATASAASVPDGTWPTSQGDVYYTESYTVAAGETFDGGLKTYQRSDITCEGQEESGSSTAVFLVEAGGTLKNVIIGADQMEGVHCNDHDCTIENVWWDDVCEDALSIKGSSASSVSTVTGGGARNADDKVIQHNGYGTVNIDGFYADTFGKLYRSCGTCGDRQRFVTVSNVYAVNPSVSIVTVNENYGDEATLSNIWISSDDDGYAVCAWSEGSEDGEPTELGDGIKDPLCQYSESDIHVNEDVSTAASTSSNTTTLTTSTTTSTIASASASATGTSTSSSVVSTTGSASTTTEESSTPVSSLDGETSVGASAESASSSVSEETSAPSASEDETSASSSSSYEATTSASESTEAPTTSSNIGEEAETSVAGSSASTPSVTTATSTDTKCNTRNRNRNRN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42416.9 | 414 | 4.01 | -0.382 | 38.65 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: