Effector profile
PlantPEAD ID: PlantPEAD22041 Uniprot ID: C6DI48 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 554 Pathogen type: Bacteria
Species: Pectobacterium carotovorum Strain: subsp. carotovorum strain PC1 Other name: Erwinia carotovora subsp. carotovora
Gene name: NCBI Gene ID: CP001657
Entry name: C6DI48_PECCP Protein name: pectate lyase
DOI:
Gene/Protein information
Gene sequence:
ATGGCTGATATGACGATTACGCTCAGCATACAACCCGGCGCAGGCCTGTCCTCAACAGGCCTGAATTCCCCGCTTTCAGGCAGCAACAGCGGGGCATCGCAACGCTCTGCACAGCAAGATAGCCAGCTCATGGAGGCACTGGGCACCCTGCTCAGCGCGCTCTTGCCTAATGCACAGGGCAATACACCGTCCTCGACCGATGGCAGCCCGCTAGGCCAGACGGGCGCGGGCAACGGAGGGAGCTCGGCGTTAGGACAAAACGGCAGCCCCGCCGATATGCTGATGAAACTGTTGGAAGCGCTAATTCCAGGGAAAAACGGGCAGGAAGCAGGGAATCCGCTCTCTTCCGGTTCGTCGGGTGCGGCAGGTGGCAATAGTGGTGCCTCACCGCTGACGGGATCATCTGGCCCTGGTGGCGCAGGTAGCGCACAAAACCCAGAAGATCTGAGCCGCTCTCTGCTGCAAGATTCGGCTGGCAGCGCATTAGATAATGCCATTAGCCCAACGGCGGACGGCGGCGGCCAACTGAGCGGTAACGATCTGTTAAAAGCGCTGCTGGAATTGATCGGCAATCTGATGGATTCACAGAAAGGTGAGTTTGGCCAACCGCAAGGTAGCGGCCAATCCCAAGGTGGCGGATCGCCGTCAGTGGGCGCACCGCAGGCTGCATCCGGCGGTGGCGGTGGATCGCCTGCCGCACCGTCTGCTGGCGGCGGCGGTTCACCTGCTGCACCATCAGCGCCCGCTTCACCCGTTGGAGGCGGCGGCGCAGCACCCGCTCCACTAACGGCCACACCATCTGGCATTGGTGGCGGTTCGGCAACATCCCCCACGACATCAACAGCAGGTGCTGGCCCAGTCTCTTTCCCAACCGCCAGCGGTGATGCCACCGTGGTAAATGAAACCATTAAAGTCGGCCCCGGCGAAACCTTTGACGGCGGTGGTAAAACCTTTACTGCTGGCAGCAAGTTAGGTGACGGCGGCCAGGCTGAAGGCCAGAAACCAGTATTTGAGCTGGCTCCGGGCGCGACGCTGAAAAATGTGGTGTTTGGTGATAACGCAGCGGATGGTGTGCACGTTCGCGGCGATGCCAAGATTGATAACGTACACTGGACCAACGTGGGTGAAGATGCGCTGACGGTGAAATCCAATACCGGCAAACCTGCTAACGTGGAAATCACCAACAGTAGCGCTCAGGGTGCTGCCGACAAGATTTTCCAGTTGAACGCAGACGCCAATCTGACCATCGATAATTTCAAAGCGAAAGATTTCGGTACATTTGTTCGCACCAACGGCGGACAACAGGGTAACTGGAATTTGAACCTGAGTAACATTGATGCAGAAAACGGCAAGTTCTCATTCGTGAAAAGCGACAGTGAAGGGTTGAACGTTAAAGGCAGCAATATCAACCTGACGAATGTCAATAATCACTACAAAGTGCCTGACTCCGCCAACTTGCAGGTGAATTAA
Protein sequence:
MADMTITLSIQPGAGLSSTGLNSPLSGSNSGASQRSAQQDSQLMEALGTLLSALLPNAQGNTPSSTDGSPLGQTGAGNGGSSALGQNGSPADMLMKLLEALIPGKNGQEAGNPLSSGSSGAAGGNSGASPLTGSSGPGGAGSAQNPEDLSRSLLQDSAGSALDNAISPTADGGGQLSGNDLLKALLELIGNLMDSQKGEFGQPQGSGQSQGGGSPSVGAPQAASGGGGGSPAAPSAGGGGSPAAPSAPASPVGGGGAAPAPLTATPSGIGGGSATSPTTSTAGAGPVSFPTASGDATVVNETIKVGPGETFDGGGKTFTAGSKLGDGGQAEGQKPVFELAPGATLKNVVFGDNAADGVHVRGDAKIDNVHWTNVGEDALTVKSNTGKPANVEITNSSAQGAADKIFQLNADANLTIDNFKAKDFGTFVRTNGGQQGNWNLNLSNIDAENGKFSFVKSDSEGLNVKGSNINLTNVNNHYKVPDSANLQVN
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
47302.3 489 4.51 -0.335 39.65
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.