Effector profile
PlantPEAD ID: PlantPEAD22042 Uniprot ID: D5GSK4 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 554 Pathogen type: Bacteria
Species: Pectobacterium carotovorum Strain: Other name: Erwinia carotovora
Gene name: HrpW NCBI Gene ID: FN597645
Entry name: D5GSK4_PECCA Protein name: pectate lyase
DOI:
Gene/Protein information
Gene sequence:
TTACTTCACCTGTAAGTTGGCGGAATCCGGCACTTTGTAGTGATTATTGACGTTCGTCAGGTTGATGTTACTGCCTTTGACGTTCAGCCCTTCACTGTCGCTTTTCACGAACGAGAATTTGCCGTTTTCTGCGTCAATGTTGCTCAGGTTCAAGTTCCAGTTACCTTGTTGTCCACCGTTGGTGCGGACAAACGTACCGAAATCTTTCGCTTTGAAATTATCGATGGTCAGGTTGGCATCCGCATTCAACTGGAAAATCTTATCGGAAGCGCCCTGAGCGCTACTGTTGGTGATTTCAACGTTGGCAGGCTTACCAGTATTGGATTTCACCGTCAGCGCATCTTCACCCACGTTGGTCCAATGCACGTTATCAATTTTGGCATCGCCGCGAACGTGTACGCCATCCGCTGCATTATCACCAAACACCACGTTTTTCAGCGTTGCGCCCGGAGCCAGCTCAAATAGCGGCTTCTGGCCTTCAGCCTGGCCGCCGTCGCCTAACTTGCTGCCTGCGGTAAAGGTTTTACCACCGCCGTCAAAGACTTCGCCGGGGCCGACTTTGATGGTGTCATTTACCACGGTGGCATCACCGCTGGCCTTTGGGAATGCAACTGGGCCAGCACCTGCTGTTGACGTCGTGGGGGATGTCGCCGAACCGCCATCAACGCCAGTTGGGGCGGCTGTTAGTGGAGCAGACGCGCCGCCGCCGTTACCACCAACGGGTGAAGACGGAGCAGAAGGTGAACCACCGCCGCCAGCAGAGGGTGCAGATGGCGCGGCAGGCGACCCAGCCCCACCGCCGGATGAAGCCTGCGGCGCACCCACTGACGGCGATCCACCGCCTTGTGGCTGCCCGCTTTCTTGCGGCTGACCGAACTCACCTTTCTGTGAATCCATCAGATTGCCGATCAATTCCAGCAGCGCTTTTAACAGATCGTTACCGCTCAGTTGACCACCGCCGTCTGCCGTTGGGCTAATCGCATTATCTAATGCGCTGCCTGCCGAATCTTGCAGTAGGGAACGGCTCAGATCTTCTGGATTTTGTGTACCGCCTGCGCCACCCGTGCCGGATGAACCCGCCAGCGGTGAGGCACCGCCGTTGCCGCCTGCTGCACCCGACGAACCGGAAGAGAGTGGATTCCCCGCTTCCTGACCATTTTTGCCCTGAATCAGCGTTTCTAGCAGTTTCATCAGTATATCGGCAGGGCTGCCGTTTTGCCCTAACGCCGAGCTGCCACCGTTGCCCGCGCCGGCCTGACCCAACGGGCCGCCATCGGTTGAGGATGGCGTATTGCCCTGTGCATTAGGCAAGAGCGCGCTAAGCAATGTGCCCAGCGCTTCCATAAGTTGGCTATCCTGCTGCGCAGAACGCGGTGAAGCCCCGCTGTTGCTGCCCGAAAGCGGGGAATTAAGACCAGTCGATGACAGTCCTGCGCCGGGTTGTATGCTGAGCGTAATCGTCATATCAGCCAT
Protein sequence:
MADMTITLSIQPGAGLSSTGLNSPLSGSNSGASPRSAQQDSQLMEALGTLLSALLPNAQGNTPSSTDGGPLGQAGAGNGGSSALGQNGSPADILMKLLETLIQGKNGQEAGNPLSSGSSGAAGGNGGASPLAGSSGTGGAGGTQNPEDLSRSLLQDSAGSALDNAISPTADGGGQLSGNDLLKALLELIGNLMDSQKGEFGQPQESGQPQGGGSPSVGAPQASSGGGAGSPAAPSAPSAGGGGSPSAPSSPVGGNGGGASAPLTAAPTGVDGGSATSPTTSTAGAGPVAFPKASGDATVVNDTIKVGPGEVFDGGGKTFTAGSKLGDGGQAEGQKPLFELAPGATLKNVVFGDNAADGVHVRGDAKIDNVHWTNVGEDALTVKSNTGKPANVEITNSSAQGASDKIFQLNADANLTIDNFKAKDFGTFVRTNGGQQGNWNLNLSNIDAENGKFSFVKSDSEGLNVKGSNINLTNVNNHYKVPDSANLQVK
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
47499.6 490 4.53 -0.354 37.35
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.