Effector profile
| PlantPEAD ID: PlantPEAD22044 | Uniprot ID: A0A0U5FFS2 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 346 | Pathogen type: Bacteria |
| Species: Xanthomonas citri | Strain: pv. citri strain JP541 | Other name: |
| Gene name: HrpW | NCBI Gene ID: CCXZ01000158 | |
| Entry name: A0A0U5FFS2_XANCI | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATTTCCTCAATCAACCCCTATATCAGTGCTAACCCACTCCTCAACCACACGCTTCAGACGAAGCAGCCCGCATTTTCCGACACGATCATTATGCTGATGTCGGAATTGCTACAGCGGTTGATACAGACCCAATTCCAACCTCAAAACACGTCGCAATACGATTGGAACCCTTCGCCTTCCCATGGGACGTCCAATGGCCAAGGGGAGGGCAACGAGCATGGCGGTCGCAGGAACGGACGCGGCGGTGACAACTTCCTCGCCACCACGCCCGAGACGTCCGACCATTCCGACAAATCCGCTCACTCGACCGTCACCGGCAGCGGCCCCGTGGGGAGCGGTCGCACGATCAACGTCAACAGTCCGATCGTGGTTCACAAGGGCGAGGTGTTCGACGGACACAACAATCTCTACGTCGGCGGGTCCGGCATCGGCGATGGTTCGCAGTCCGAGCACCAGCAACCGATGTTCGTCGTCGAACAAGGCGGCACCCTCCAAAACGTGCGGATGAGCGGGGGCGGCGACGGCATCCATCTGCTCGGCGACGCCACGCTGAAGAACGTCCACAACCTGAACGTCAGCGAGGATGCGATGACCATCGACGGCCCTGGCAACCGGGAACATGACTCGCGCATTGCCGGAACGCCTGCCAGCGGCCTGCCGGCGCGTCCAAAGATCGAAATCCTCGACAGTTCCTTCGACAATGCCTCCGACAAGGTGATCCAGGACAACCAGGCGGCAGATGTGCTGTTGCGTAACGTCAGCGTGAACGGAGCCGGCAAGGTGTTCCGCACCAACGGCGGACACACCGACATCGATTCACACGTCACGGTCGAAGACTCCACCCTGAAAGGCATCAAGGAAGCAGTATTCCGCACCGATGCCCCCGGCGCACATGTCAGTCTGCATGGCGTCCGCGACGATGCTCCCCATCAAGTGGAGGCACTGTCCCCCAGTCAGGCAGATGGCGCACGCAGCGTCAGCCGAAAGGAATATACAGGTTGA
Protein sequence:
MISSINPYISANPLLNHTLQTKQPAFSDTIIMLMSELLQRLIQTQFQPQNTSQYDWNPSPSHGTSNGQGEGNEHGGRRNGRGGDNFLATTPETSDHSDKSAHSTVTGSGPVGSGRTINVNSPIVVHKGEVFDGHNNLYVGGSGIGDGSQSEHQQPMFVVEQGGTLQNVRMSGGGDGIHLLGDATLKNVHNLNVSEDAMTIDGPGNREHDSRIAGTPASGLPARPKIEILDSSFDNASDKVIQDNQAADVLLRNVSVNGAGKVFRTNGGHTDIDSHVTVEDSTLKGIKEAVFRTDAPGAHVSLHGVRDDAPHQVEALSPSQADGARSVSRKEYTG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 35359.6 | 334 | 5.59 | -0.596 | 38.83 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG: xcf:J172_03098,xcm:J164_03082,xcn:J169_03105,xcr:J163_03082,xcu:J159_03082,xcw:J162_03085
PRINTS: