Effector profile
| PlantPEAD ID: PlantPEAD22060 | Uniprot ID: A0A6V7C1Q8 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 56454 | Pathogen type: Bacteria |
| Species: Xanthomonas hortorum | Strain: pv. carotae strain CFBP 7900 | Other name: |
| Gene name: | NCBI Gene ID: CAJDKC010000003 | |
| Entry name: A0A6V7C1Q8_9XANT | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCAGCCGCTGTAGGCCTTGTGGCCGATACGTGTCGCACCTATCGCCTGGGAAGCGTCGGGGGCAATCACCTCGTCGGGCGCATCGGTCTTCAGGTTTGCCAGCGTCACCGTCGCGCCGCGCGCGTCGGTCCGGAACACCGCTTCCTTGACCTGGTTGAACTCGCAATTCTCGACCTGAAGGTGCGAGTCGATATCGGCATGCCCACCGTTGGTGCGGAAGACCTTGCTGGCGCCGTTGACGGTGTCGCCCGACATCACCACGTCGGCAGCGCCGTTGTCCTGCACGACCTTGTCTGCGGCGTTCTTGAACGTGCAATTGATGATTTCGACCTTCGGCCGGCCGCTGACCTCGGGGCTGCAACCGGCAATCCCCGCATCGTGCTCACGGTTGCCCTGCCCATCGATGGTGACTGCATCCTCGCTGACATCTTCGTTGACGCAGTTGACCATCTTGCCGCTGGCCATGAAATGCACACCGTCGCCGGTGCCACCCATGCGGACGTTGCAGAGGCTGCCACCGTCCTCGACGACGAAAAGTGGCTGCTGGTGCTCGTTCTGGGAGCCATCGCCCAGGCCTGGGCCACCGGTGTAAAGCTGGCCCTTGCCGTCGAACACCTCGCCCTTGTGCACCACGATGGGCTTGTTCTGGATGCCGGGTGGCGCGGTGACGACCTTGCCGGGAGGCAGTGGCGCCTGCGTGCCGGTCGGGCCTGGCGTGCCGTGAGCACCGTCGGTGGGCGTGGGTGTTGGAGTCGCCGAGTGACCCGGGTTGGTGTGCGATGCGCCGTTGCCGGCTCCCGTTCCGGAGGTGTTGCTGCCGTTGCCACCGTTGCCACCGTTGTTGCCATTGCCATTGCCATTGCCGGCACCGCTGCCGTGTTGCCCGCCGGGGTTGGTGGAACACGGCGGGTTCGATGGCGGCATCGATGGTGTCGGATTGAAGTTGGTCGGTTGCTGACCGTCACTGGATGGCTGATCTTGTGGCTGCATCATGTCGCTGAGCAGGCGTTGCATGCAGTACGCCAGCATGCTCATGATCACCGCAGTGAGGGCTTGCTGCTCCGAAGGGGAGAATGAGGACGGCTGTAAGCTCGCAGTGGTATGTGAGGGAATGGCGAGATTCAT
Protein sequence:
MNLAIPSHTTASLQPSSFSPSEQQALTAVIMSMLAYCMQRLLSDMMQPQDQPSSDGQQPTNFNPTPSMPPSNPPCSTNPGGQHGSGAGNGNGNGNNGGNGGNGSNTSGTGAGNGASHTNPGHSATPTPTPTDGAHGTPGPTGTQAPLPPGKVVTAPPGIQNKPIVVHKGEVFDGKGQLYTGGPGLGDGSQNEHQQPLFVVEDGGSLCNVRMGGTGDGVHFMASGKMVNCVNEDVSEDAVTIDGQGNREHDAGIAGCSPEVSGRPKVEIINCTFKNAADKVVQDNGAADVVMSGDTVNGASKVFRTNGGHADIDSHLQVENCEFNQVKEAVFRTDARGATVTLANLKTDAPDEVIAPDASQAIGATRIGHKAYSG
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 37981.6 | 374 | 5.08 | -0.521 | 23.4 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: