Effector profile
| PlantPEAD ID: PlantPEAD22074 | Uniprot ID: L7PID0 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 56448 | Pathogen type: Bacteria |
| Species: Xanthomonas arboricola | Strain: LMG 19146 | Other name: |
| Gene name: HrpW | NCBI Gene ID: JQ595993 | |
| Entry name: L7PID0_9XANT | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAATCTCGCCATTCCCTCACACACCACTGCGAGCTTACAGCCGTCCTCCTTCTCCCTATCGCAGCAGCAGGCCCTCACCGCGGTGATCATGAGCATGCTGGCGTACTGCATGCAACGCATGCTCAGCGACATGCTGCAGCCACAGGATCAGCCATCCAGCGACGGCCAGCCGCCGACCAATCCCACTCCGACACCTTCGCTGCCGCCCTCGAACCCGCCCGGTTCCAGCAACGCCGGCGGGCAGCACGGCAGCGGGACCGGCGATGGCAGCGGCAGCAATGGCGGCAACAACAAAGGCAGCGGAAGCACCAGCGGGACAGCAGCCGGCAACGGCGCATCGCCCACCAGCCCAGGTCAACCGGCAACGCCGCCCGGCAGCGGTCAGCCGGTCACGCCCGGCCCCAGCGGTACGCAGGCGCCACTTCCTCCCGGCAAGGTCGTCACCGCGCCGCCCGGCGTCCAGAACAAGCCCATCGTGGTGCACAAGGGCGAGGTGTTCGACGGCAAGAACCAGCTGTACGTCGGCGGCCCCTGCCTGGGCAAAGGCAACCAGGACGAGCATCAGCAACCGCTGTTCGTGGTCGAGGACGGCGGCAGCCTCTGCAACGTCAACATGACCGGCGGCGGCGACGGCGTGCATTTCATGGGCAGCGGCAAGATGGTCAATTGCGTCAACGAGGATGTGAGCGAGGATGCGGTCACCATCGATGGCCAGGGCAACCGCGAGCATGATGCGGGGATTGCCGGCTGCAGCCCGGAGGTCAGCGGCCGGCCGAAGGTCGAGATCATCAATTGCACGTTCAAGAACGCCGCAGACAAGGTCGTGCAGGACAACGGCGCTGCCGACGTGGTGATGTCGGGCGACACCGTCGAGGGTGCCAGCAAGGTCTTCCGCACCAACGGTGGGCATACCGATATCGACACCAATCTTCAGGTCGAGAATTGCGAGTTCAATCAGGTCAAGGAAGCGGTGTTCCGTACCGACGCGCCCGGCGCGACGGTGAAGCTGGCAAACCTGAAGACCGATGCGCCCAATGAGGTGATTGCCCCCGACGCGTCCCAGGCCATCGGGGCGACACGCATCGGCTACAAGGCCTACAGCGGCTGA
Protein sequence:
MNLAIPSHTTASLQPSSFSLSQQQALTAVIMSMLAYCMQRMLSDMLQPQDQPSSDGQPPTNPTPTPSLPPSNPPGSSNAGGQHGSGTGDGSGSNGGNNKGSGSTSGTAAGNGASPTSPGQPATPPGSGQPVTPGPSGTQAPLPPGKVVTAPPGVQNKPIVVHKGEVFDGKNQLYVGGPCLGKGNQDEHQQPLFVVEDGGSLCNVNMTGGGDGVHFMGSGKMVNCVNEDVSEDAVTIDGQGNREHDAGIAGCSPEVSGRPKVEIINCTFKNAADKVVQDNGAADVVMSGDTVEGASKVFRTNGGHTDIDTNLQVENCEFNQVKEAVFRTDAPGATVKLANLKTDAPNEVIAPDASQAIGATRIGYKAYSG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 37371.2 | 369 | 4.86 | -0.46 | 34.05 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: