Effector profile
PlantPEAD ID: PlantPEAD22126 Uniprot ID: M5CHF8 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 1108050 Pathogen type: Fungi
Species: Thanatephorus cucumeris Strain: Isolate 7/3/14 Other name: Rhizoctonia solani
Gene name: NCBI Gene ID: CAOJ01017628
Entry name: M5CHF8_THACB Protein name: Pectate lyase
DOI:
Gene/Protein information
Gene sequence:
ATGGTCCAAATCTCGTTCGCTACTTTCGCTGTCATCGCTGGCGTGCTTTCTCAGACCGCACTCGCCGCCCCTTCGGAGAAGCGTGCCGCCAGCTGCTCGTTCCCGAACCCTTCTGCATCGACTAACGTCAAGCTTTCTGCGGCTCGCACCATCAAGGCCGGCGAGTCCTTCGATGGCAAGAACCTCCGCTATGGCCGCGGCGTCAAGTGCGGTGGCCAAAAGGAAGGAGGCAGCAAGGATGCCGTGTTCATCCTCGAGTCCGGTGCTACTCTCTCTAACGCCGTGATCGGTGCCGACCAGAACGAGGGCGTCCACTGCAATGGTGCTTGCACCATCCGCAACGTCTGGTTCGAGGATGTGTGCGAGGACGCGATCACCATCAGGCAGAGCTCCGGCACGACCAATATCACCGGTGGAGGCGCCAAGAACGCGTCCGACAAGGTCGTCCAGCACAACGGCGGAGGTCTCGTCAAGATCGACTCGTACTGCGTCCAGGACTTTGGCAAGCTCTACCGGTCGTGCGGCAACTGCAGCACGCAGGTTAAGCGCCAAGTGCAGATCAGCAACATCATCGCGCGCAACGGAAAGCTGCTCGCGGGTGTGAACTCGAACTTCGGGGACGTAGCGACAATCGACACCAAGTCGAACTCGTACACCAGCGTGACATCGGTATGCGACACGTTCCAGGGCAACAACAACGGCAAAGAGCCGTCGACCCTGACCAAGAACACGTCGAACGCCAGCTGCAAGTTCTGA
Protein sequence:
MVQISFATFAVIAGVLSQTALAAPSEKRAASCSFPNPSASTNVKLSAARTIKAGESFDGKNLRYGRGVKCGGQKEGGSKDAVFILESGATLSNAVIGADQNEGVHCNGACTIRNVWFEDVCEDAITIRQSSGTTNITGGGAKNASDKVVQHNGGGLVKIDSYCVQDFGKLYRSCGNCSTQVKRQVQISNIIARNGKLLAGVNSNFGDVATIDTKSNSYTSVTSVCDTFQGNNNGKEPSTLTKNTSNASCKF
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26173.2 251 8.9 -0.251 30.89
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.