Effector profile
| PlantPEAD ID: PlantPEAD22127 | Uniprot ID: M5CHG3 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1108050 | Pathogen type: Fungi |
| Species: Thanatephorus cucumeris | Strain: AG1-IB / isolate 7/3/14 | Other name: Rhizoctonia solani |
| Gene name: | NCBI Gene ID: CAOJ01017665 | |
| Entry name: M5CHG3_THACB | Protein name: Pectate lyase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGTCCAAGTATCTTTCGCTACCATCGCTGTCATCGCTGGCATGCTCGCTCAGACCACCGTCGCTGCTCCTTCGGACAAGCGCGCAGCCAGCTGCTCGTTCCCGAACCCGTCCTCGTCGACGGACGTCAAGTTCGATGCGGCCCGCTCTATCAAGGCCGGCGAGACCTTTGACGGCAAGAACCTCCGGTACAGCCGTGGGGTCAAGTGTGGCGGCCAGAAGGAAGGCGGTGACAAGGATGCCGTCTTCCTGCTCGAGTCCGGAGCTACCCTCGCTAACGCCGTGATCGGCAAAGACCAGAACGAGGGCGTCCACTGCAAGGGACCGTGCACGATCCGCAACGTGTGGTTCGAGGACGTGTGCGAGGACGCCATCACGATCAGGCAGAGCTCCGGCACGTCCACGATCACCGGCGGAGGCGCCAAGAACGCAGACGACAAGGTGGTGCAGCACAACGGTGGAGGTCAGTCCGACGCGTACCAGCTGCGGTATCGACCACCGACTTCTATCTGA
Protein sequence:
MVQVSFATIAVIAGMLAQTTVAAPSDKRAASCSFPNPSSSTDVKFDAARSIKAGETFDGKNLRYSRGVKCGGQKEGGDKDAVFLLESGATLANAVIGKDQNEGVHCKGPCTIRNVWFEDVCEDAITIRQSSGTSTITGGGAKNADDKVVQHNGGGQSDAYQLRYRPPTSI
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17790.8 | 170 | 7.61 | -0.341 | 38.63 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR004898,IPR012334,IPR011050
Pfam: PF03211
SMART:
KEGG:
PRINTS: