Effector profile
PlantPEAD ID: PlantPEAD22300 Uniprot ID: C0SPQ0 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 305 Pathogen type: Bacteria
Species: Ralstonia solanacearum Strain: RS1000 Other name: Ralstonia nicotianae, Pseudomonas solanacearum
Gene name: RipT NCBI Gene ID: AB302269
Entry name: C0SPQ0_RALSL Protein name: Type III effector protein
DOI:
Gene/Protein information
Gene sequence:
ATGAGAGTCCTTTCTCGCTTCTCTTTCACTGCGCAACCCCGAGCGGACTCCGCTGAGCCCAAGAAGGCACCGGTGGCTGGCAGTCGCGGTGCTGCTGCTCGTCCGGCAGCCCTGGAAAAGTTGACTGCGTTTTCTAGGTCCAATGCTGCAAAGCAGGCGAACAGCTTCGTGCGATCTCCTCTTCCTCTCAGAGGAGATCGGTACAGCAGCGAGCCTGGAGTTCTCCCATCGGCAGGTCAATTCGACGCGCACATTTGGGATGAGTTGCCCACGCAGATGGCACAGTGTGCGGTCGCACGTACCAGACAAGGCTTGGCTTTCCGTGCACGATTTGGGGCGGAATCCGCGCAGCACTATTCAGGCAGCTGTGTAGGCTTGTCAGCTGTATGGATTCGCCTCCACGAGGCGGCCCCGGCCACGCATGCCGTCAACCGGGTCAATACTGCCGGTTCTTTTGATGGGATGGCTCATGCTGAGGTCTATCAGCGTGCCTACGAAGCGAATCAGAGCGATATGCTGCAGGGGCGAGCTTCGAAGCGCTTTGGGAAATCAGACATGGCAAGACTTGACGCAATAGCGCAAGAGCAGCCAAGCCAGATTTTAGGCCTCACCATTGGCACCGAAGCGTATTCGCACAAAAGCGTCGGAAGCACTGCGCGTGTATTGACGGAGTTCGATGGGTATGGTTTGTTGGCTTTGCGGATGGCTGGTTCGCGGGGAGCTATTAACGGCCATGCTGCAGCACTGCATCGGCAACCAGGCAGCAGTCACATCACCTTTTTCGAGCCCAATCTCGGTGAATTCCACATTCCGTTGCACGACACCAAGGACTTTTTGCAAGCGTATGCGGGCATGCAAAAAAGTCTTGGGCAGCCTGTCTCCCAATTCGATCTGCTTCCAGTAGGCGTACACGGCTCGATCCACGACACGCCACTGCAGACGTTGGCTCATTCGCTGGTTTCATGA
Protein sequence:
MRVLSRFSFTAQPRADSAEPKKAPVAGSRGAAARPAALEKLTAFSRSNAAKQANSFVRSPLPLRGDRYSSEPGVLPSAGQFDAHIWDELPTQMAQCAVARTRQGLAFRARFGAESAQHYSGSCVGLSAVWIRLHEAAPATHAVNRVNTAGSFDGMAHAEVYQRAYEANQSDMLQGRASKRFGKSDMARLDAIAQEQPSQILGLTIGTEAYSHKSVGSTARVLTEFDGYGLLALRMAGSRGAINGHAAALHRQPGSSHITFFEPNLGEFHIPLHDTKDFLQAYAGMQKSLGQPVSQFDLLPVGVHGSIHDTPLQTLAHSLVS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
34429.8 321 9.44 -0.274 46.29
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.