Effector profile
| PlantPEAD ID: PlantPEAD22427 | Uniprot ID: A0A6G0LG49 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 53985 | Pathogen type: Oomycota |
| Species: Phytophthora fragariae | Strain: BC-23 | Other name: |
| Gene name: | NCBI Gene ID: QXFX01000352 | |
| Entry name: A0A6G0LG49_9STRA | Protein name: SCP domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGTCGGACGGAAGGAAAACAAACGAGGAACTGCTGCCCGCCATGTGGACAGCCCGACAGCTTCATCTCTCAGAACCCATGAAGTTGTCAAATGTGTTAGCATTCTCGGCTGCGGTTGTCGCGACTGTCGGCGCCGAGAGCTACGGGGAATCGGACCAAGCCATTTGGATCGACCGCCACAACTTCTTCCGCACGACTGGACTGCCATGGTCGGCCGGTAACATGCGCCGCATTGGCTGGGACGCTGACTTGGCGACTAAGGCCGCCTCCACTGCTAAAAAGTGTTCAGCCACGACCTCGACAGGCGTGAACGCATTCCAATCGTCGGTCGCCAATGCGTCGGACGCGATCGACCAGGCGATTCAGCAATGGGTCGTGGAGACGGCCGTGTCCACGATCAAGACGATGGCTCAGCCCGGCTCCAGCGGTCTGGATGTGGGTATCGGTGTCTACAACTCGTACTCGCAGGTGGTGTGGGCGTCGACGACCAGCGTTGGATGCGCGACGGCGACCTGCTCGGGAGGTGAATTGGTAGTGTGCGAGTACTCACCGGCCGGAAATGATGGCAAGTCTGCTTGGTACAGCCACGCAACTCAAGCGTCTGAATGCCCCGACAATACGGTCGCAGACGGTGGTCTCTGTGTGGAAGAAGGCGACAAAGCCAACAATGCGATCGCGCCGATTGCAGCGGGTGACTACACGTACCAGGTATACCCGGCGTTCGTAGCGGATATTCAGACCATTCTCCTGAATTCTGCGCGTGATATCGCCAACGGTATCATTCCTCCGATGGCGACAACAGCCACGCCCAAGGAGGACTCTTCTGAGACGTCTACGAAGCAGGAAAGTGCAAAGTCCTCGTCCTCGTCGGCGACGCAAGATGACAGCTACCTGAGTCCTGGCAAGGTGAGGCCGAGCTCAAACACTGGCTCAACCTTCCAGAACGAGGTCAAGGCCCCCGCAGCCCAGGAATCGACCCAAACGGCGCTGAAATCCTCAACGTCGAGTGAAATCTCCACCAAGGAACAACAGACCACCAAGGAAGAGGCCGAGTCTCTGACGTCCAGCAAAGAAGGAGGCGCGGGCTCGCACGGCATGACGACCCTCGGCATGGTCAGCATGTTCATTCTCGGTGTCGGAGCGGTGGCCGGCATCATCATGTTCGTTCACTACCGCGTGGCCGCTCAGCGCCAGAACGACGTCCTCCTCGACGGTGGCATCCAGAGATAA
Protein sequence:
MSDGRKTNEELLPAMWTARQLHLSEPMKLSNVLAFSAAVVATVGAESYGESDQAIWIDRHNFFRTTGLPWSAGNMRRIGWDADLATKAASTAKKCSATTSTGVNAFQSSVANASDAIDQAIQQWVVETAVSTIKTMAQPGSSGLDVGIGVYNSYSQVVWASTTSVGCATATCSGGELVVCEYSPAGNDGKSAWYSHATQASECPDNTVADGGLCVEEGDKANNAIAPIAAGDYTYQVYPAFVADIQTILLNSARDIANGIIPPMATTATPKEDSSETSTKQESAKSSSSSATQDDSYLSPGKVRPSSNTGSTFQNEVKAPAAQESTQTALKSSTSSEISTKEQQTTKEEAESLTSSKEGGAGSHGMTTLGMVSMFILGVGAVAGIIMFVHYRVAAQRQNDVLLDGGIQR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42784.3 | 409 | 4.83 | -0.244 | 35.65 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR014044,IPR035940,IPR001283
Pfam: PF00188
SMART: SM00198
KEGG:
PRINTS: PR00837