Effector profile
| PlantPEAD ID: PlantPEAD22513 | Uniprot ID: A0A1X2HQP8 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 13706 | Pathogen type: Fungi |
| Species: Syncephalastrum racemosum | Strain: NRRL 2496 | Other name: Filamentous fungus |
| Gene name: | NCBI Gene ID: MCGN01000002 | |
| Entry name: A0A1X2HQP8_SYNRA | Protein name: CAP domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCGCTCCCTTACCTTCCTTTCCTTTGTCCTGGCCTTGTTTGCCTCCGTGGTCTCAGCCATCTCAGCCAAGAGCGCCAAAAATGTTCTGAAGGTCCATAACAAGTATCGGGCCAAGCACTCGGCTCCTGCCCTCAAATGGAACTCCACCCTGGAGCATTATGCCCAGCATTGGTCGAATGCCTGCGACTTCAAGCATAGCCAGGGCCCCTATGGCGAGAACCTTGCTATGGGCTATAGCAACTGGAACGACGCCATTGCTGCTTGGTACAATGAGGGCGAGCAGTATTCGTACAACAACCCTGGTTTCTCGTCGAGCACCGGTCATTTCACTCAGGTCGTCTGGAAGTCGACTACCCAAATCGGCTGTGGCGTCAAGAAGTGCCCTGATGGCTCCAAGATGTATACTTGCAGCTACTCCCCTCCGGGTAATGTTGTTACGGCTGACAACTCTTTCTTCAAGAAGAACGTGCTTCCCAACTAG
Protein sequence:
MRSLTFLSFVLALFASVVSAISAKSAKNVLKVHNKYRAKHSAPALKWNSTLEHYAQHWSNACDFKHSQGPYGENLAMGYSNWNDAIAAWYNEGEQYSYNNPGFSSSTGHFTQVVWKSTTQIGCGVKKCPDGSKMYTCSYSPPGNVVTADNSFFKKNVLPN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17732.9 | 160 | 9.26 | -0.421 | 28.44 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018244,IPR014044,IPR035940,IPR001283
Pfam: PF00188
SMART: SM00198
KEGG:
PRINTS: PR00837