Effector profile
| PlantPEAD ID: PlantPEAD22522 | Uniprot ID: M5CCM1 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1108050 | Pathogen type: Fungi |
| Species: Thanatephorus cucumeris | Strain: Isolate 7/3/14 | Other name: Rhizoctonia solani |
| Gene name: SC7 | NCBI Gene ID: CAOJ01016881 | |
| Entry name: M5CCM1_THACB | Protein name: Fruiting body protein SC7 | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGGTTCGCTCCACTACCGCCGCCCTCGCGCTCGTTGTTGCTGCCGGTTCTGTCTCTGCCCACTGGCGCGAAGAGGTCTCCAATGTCAATATGACTGGTACCCATCTTCTAGCTTCGCGCGCCGTGCCACAGGACTACCTTACTGCGCACAACAACGAACGTGCCAAACACGGCGCTAAGGCACTTGTTTGGGACAACGGTCTTGCATCGTCCGCACAAGCCTGGGCTAACCAGTGCAAATTCCAACATAGTCAATCAGGCCAGAACCTGTATGCCGGTACCGGTAACCCGACGGCTGCTGCTGCTGTTGGCGCATGGAATGCCGAGTCTAAGGACTACAACCCAGCAAATCCACAATATTCTCACTGGACCCAAGTTGTCTGGAAGGGAACCACGAAACTCGGGTGTGCTTTGAAACAATGTGCGCCGGGAACCATCTTTGACGCTAAATACGTTGCCAACTACTACGTTTGCCACTACAACCCAACTGGAAACGTCATCGGACAATTCCCTCAAAACGTTCAGAAGTAA
Protein sequence:
MVRSTTAALALVVAAGSVSAHWREEVSNVNMTGTHLLASRAVPQDYLTAHNNERAKHGAKALVWDNGLASSAQAWANQCKFQHSQSGQNLYAGTGNPTAAAAVGAWNAESKDYNPANPQYSHWTQVVWKGTTKLGCALKQCAPGTIFDAKYVANYYVCHYNPTGNVIGQFPQNVQK
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 18949.1 | 176 | 9.08 | -0.368 | 24.91 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018244,IPR014044,IPR035940,IPR001283
Pfam: PF00188
SMART: SM00198
KEGG:
PRINTS: PR00837