Effector profile
PlantPEAD ID: PlantPEAD22744 Uniprot ID: A0A3M3MJE8 Source: Orthologous
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. apii strain1089_5 Other name:
Gene name: NCBI Gene ID: RBPL01000112
Entry name: A0A3M3MJE8_9PSED Protein name: Type III effector HopAF1
DOI:
Gene/Protein information
Gene sequence:
ATGGGGCTATGTATTTCAAAAAATTCTGGTAGCAGCTACAGCTACAGTGATAGCGACCGCTGGGAAGCGCCTGCATGTCCTCCAAACGCCAGGTCTGTTTCCAGTCATCAAACAGCATCTGCGAGTGACATCGCATCAGGCGATGTGGATGAACGTCCTGCAACGTTTTCTCATTTTCAACTTGCGCGGTGCGGTGGAGAGTACACGCTTAGCATGGTTTCTGCAGCGGCTTATCAAGCAGAAAGACGGCATCGCGGTAATTTAATAAAAGATCGTAGTCAATCCATACTCCCATGGGTCCAGGTATATCATTCTAAAAAAGGTTTGGATTACAGCTTCAAGATCGACAGAACTACGACTGTTAAAGTGGCTGGGTTCAACTGCTCTATCCCCAATAACAGAGGGACTCGGCATTTATACAGCGCTGGTACGAGTCAGACAAACATGCCCGTCATCGCAGACAACATGAGCGCATGCATTGCTGTCGCGTGTGCGGCGGAAAACGTGGATGCTGGCACGGGTGAACGTAGGCCGGGGGCGAAAGTCCGCGTATTCCATCTGCTCCCTTTTCGCCGCGAAGATCTTGTGCCGGAAGAAGTTCTAGCTTCTGTACGTGACTATTTGCGAACCACCAAGGAACAGGGGCTGACACTGCGCGTAGCCATGCATGGAGGGAATACAGAGGGCGATTTCTCAGTCAGCACTGCGCAGGCTTTGAAAAGCCTGTTCGCAGATGAAGGGATCCCGCTTGAGTTTGACGAGACCTGTGCAAACCGAATGTCTGAAACACTGCTTGGCGCCGTTATCTTAGATGACAACTCGACTCATTTCATAAAACACTTGGTCGCACAATAA
Protein sequence:
MGLCISKNSGSSYSYSDSDRWEAPACPPNARSVSSHQTASASDIASGDVDERPATFSHFQLARCGGEYTLSMVSAAAYQAERRHRGNLIKDRSQSILPWVQVYHSKKGLDYSFKIDRTTTVKVAGFNCSIPNNRGTRHLYSAGTSQTNMPVIADNMSACIAVACAAENVDAGTGERRPGAKVRVFHLLPFRREDLVPEEVLASVRDYLRTTKEQGLTLRVAMHGGNTEGDFSVSTAQALKSLFADEGIPLEFDETCANRMSETLLGAVILDDNSTHFIKHLVAQ
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
30953.7 284 6.5 -0.343 43.5
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.