Effector profile
| PlantPEAD ID: PlantPEAD22801 | Uniprot ID: A0A1Y3NVT5 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 1451454 | Pathogen type: Bacteria |
| Species: Pseudomonas caspiana | Strain: FBF102 | Other name: |
| Gene name: | NCBI Gene ID: LOHF01000024 | |
| Entry name: A0A1Y3NVT5_9PSED | Protein name: Cell filamentation protein Fic | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCATGGTTTTTCCAGTGTCTCAGGTATGAAGCCTTGTTCCCTGAGCGACTTGATGACTCCCCGAATCAGATAATTGTTGGAGAATCCTATTGTGTATTGCCTCGCTCCTGGGTTAAGAGGTAAGAGCATTCCCTGATCCACCAGTTTTTTTATCAGGTAGGTCCGTTGATTACTCGACTGCTGGGGCAGTACAGCTGCAACGTCTGCAGATTTCACTACCTTCAGTTTTATCGCGGCCGAGAGCACCAGTTCTTCAGTCTCGGTGATCCACTCTCGTTCCCGTGCGAAAGCTACAGAAGGGGCGAGTATGCATTTGGTGAGGTAGGAGTAATTTGTAAGGCGGTCGACCTTTTCAAGCTCATCGCGAATGCCTTCCAGCACATAAGTACACCATTCTTCCAGCCCCTCCTTGGTTCCCTTGTCGGCTGTGGCGAGCATCGCGTAATAGCGGTCACGGTCGTTGCAGAACACGGCTGTAGGATTCAAGACGCGACCGCCCGTGCTGACGTTGAAACCATATTTCATCAGTAGCGCGTACGTGAGCAGCCTGACCACGCGGCCATTACCATTGCCGAATGGATGTATCCATCCAAATCTGTGATGTGCCAGCGCTACTTTCATGAGGTCGTATTTCGGAGAGTCTTCGTGATTCACGAAGTCGACGAGTTCCTGCATATAAGCTTGAACCTGGATGAAGTCGGGAGGCATGTGATCAGACTGGGATATTCTGACCCCTCCACTGCGATAGGCTCCGGGCGTTTTGTCGCCCTCACGCACAAGATCGTCTACGGTCATCGCGTGTAGCTCTCGAATCGTCTGCTCGGTCAGCGCTGCGCCGGGAGCCATGATCTCCTCAATGTAATCCATCGCCTTTTCAATATTGGCAACCTCGCGCAGTTGGTCGGTGTCCTGAGCCTTACCTTCTACCTTGCTATCTATGTAGTCCGCCAAAGTAGTGTGGTTGCCTTCAATGCGGGCAGAACCCAGGCTTTCCAGTGCATGGAAAAGCGATTTGAGTTGATAGAACACCTGCGGTGGCGTATCGCCCTCAAGCCTTAGGCGGCGCAGATGCTCCAGTTCGCTCAATACATCGACAAGAGCCGAGTCAAAGGACGGATTGAGAAGCTCAAGGTCGTGATGGGTAAATGTAGGCAT
Protein sequence:
MPTFTHHDLELLNPSFDSALVDVLSELEHLRRLRLEGDTPPQVFYQLKSLFHALESLGSARIEGNHTTLADYIDSKVEGKAQDTDQLREVANIEKAMDYIEEIMAPGAALTEQTIRELHAMTVDDLVREGDKTPGAYRSGGVRISQSDHMPPDFIQVQAYMQELVDFVNHEDSPKYDLMKVALAHHRFGWIHPFGNGNGRVVRLLTYALLMKYGFNVSTGGRVLNPTAVFCNDRDRYYAMLATADKGTKEGLEEWCTYVLEGIRDELEKVDRLTNYSYLTKCILAPSVAFAREREWITETEELVLSAAIKLKVVKSADVAAVLPQQSSNQRTYLIKKLVDQGMLLPLNPGARQYTIGFSNNYLIRGVIKSLREQGFIPETLEKP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 43367.4 | 384 | 5.46 | -0.3 | 34.76 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR003812,IPR036597,IPR040198
Pfam: PF02661
SMART:
KEGG:
PRINTS: