Effector profile
| PlantPEAD ID: PlantPEAD22809 | Uniprot ID: A0A3M5PCR7 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 33069 | Pathogen type: Bacteria |
| Species: Pseudomonas viridiflava | Strain: ICMP 19473 | Other name: |
| Gene name: | NCBI Gene ID: RBTP01000028 | |
| Entry name: A0A3M5PCR7_PSEVI | Protein name: Fic protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TTAACGAGCAGGCCAGTTGATCTGATAACGCGTACTGCGACCGCCACCGGGCAGGCGGACGATGCAGTGCTTTGCCAGTAAATCACTAAGGTGGCGAGTGGCGGTCGCTTTTGAGACTTTGGTTACGGCTTGATACTGCGCCGCGTTGATGCCCTGTTCAAAGCCGCGATCGCCTCCATCGAGCAGGCGATTGAGCACTTTCACCTGTTCAGTGGATAAAGCATCAGCCTGATGCAGTTGCCAGAAGCGTGTTTTTGCCAGGACTCGTTCTATACGTGCCAGCGCATGTTCAACGCTTCGCATAAAGGTGCGCAAAAACCACTCCAGCCATTCGGTGATATCGGTCGTGCTTTTCTGGCTGCGCTCCAGAATGTGGTAGTAACCCGAGCGGTCTTCGAGAATGCTGGCTGACATGGCGTGCAGCCGCACCGTCTGCTGCTCGCCCTGAGCCAGAGCCAGGTCCGTGAGCGCACGGGTCAGACGACCGTTGCCGTCGTCGAATGGATGCAGCGTGACAAACCAGAAGTGCGCGATGCCTGCCCTAACCAGTGGGTCAAGGTGTGCATCGTTCTGGCTGGCGGCAAACCAGTCCAGAAAGTCATTCAGCTGTGGTTCGAGCTGGGAACGTGGCGGGGCTTTAAAATGCACAGTGGGCCGATCAAGGCGACCGGATACCACCTGCATGGGCTCATTACCGCGCAGTTGGCCTGCTTGAACCTGATGAGAGGCGAGCGTTTCCTGAGTTGGAAACAGCCAGCGATGCCATTTGAACAGGCGTTGGCGCGTGAGCGGCTGATCGTTGGCCTGCGTGACATCCAGCATCAGTTCCGCCAGGCCTTCACTGCGAGGACTGCGCTTGCCATCATCGTCCAGGCCCAGGCCCAGGCGACGCGCCAGCGATGATCTGACGGATCCGGCGTTCAGTTGCTCACCTTCAATTGCAGAGGACGTGATGATGTTTTGCAGCAACGTGTCCAGAGTGTCCTGAAGGGCTGTGTCGTCGTTGGCAACGCGGCTCATGCCCAGCAAACGGCCTTGTGCCTGGGTGCATTCGCGCAGCAGTGCTGCAAGGCGGTCACCGTTCCATGTGAATGCAGGCCATTGCGGCTGTTGCCAGATCCAGAGATGTTCAGACATGAGCGGTGTGCTCTGAGCCGAGCCGAATAGAAGGTCTAATCGGCTCAT
Protein sequence:
MSRLDLLFGSAQSTPLMSEHLWIWQQPQWPAFTWNGDRLAALLRECTQAQGRLLGMSRVANDDTALQDTLDTLLQNIITSSAIEGEQLNAGSVRSSLARRLGLGLDDDGKRSPRSEGLAELMLDVTQANDQPLTRQRLFKWHRWLFPTQETLASHQVQAGQLRGNEPMQVVSGRLDRPTVHFKAPPRSQLEPQLNDFLDWFAASQNDAHLDPLVRAGIAHFWFVTLHPFDDGNGRLTRALTDLALAQGEQQTVRLHAMSASILEDRSGYYHILERSQKSTTDITEWLEWFLRTFMRSVEHALARIERVLAKTRFWQLHQADALSTEQVKVLNRLLDGGDRGFEQGINAAQYQAVTKVSKATATRHLSDLLAKHCIVRLPGGGRSTRYQINWPAR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 44595.4 | 394 | 7.92 | -0.43 | 49.13 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR025230,IPR003812,IPR036597,IPR040198,IPR036388,IPR036390
Pfam: PF13776,PF02661
SMART:
KEGG:
PRINTS: