Effector profile
| PlantPEAD ID: PlantPEAD22988 | Uniprot ID: A0A178ET29 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 5551 | Pathogen type: Fungi |
| Species: Trichophyton rubrum | Strain: CMCC(F)T1i | Other name: Athlete\'s foot fungus |
| Gene name: | NCBI Gene ID: LHPM01000018 | |
| Entry name: A0A178ET29_TRIRU | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATGGTTAACATTCAGTTGATACTTGGAGTCATTATCCTCCTCGGTACGAGGAAGGCTGCCACAGCTGCCCTACCTCCCCACCCTTGCGCTTTCGCTGCAACAGCGGCAAATGGTGACACCTGTCAGTCCTTAGCTGCCGAACGAGGAATTGGTATGGACCAATTTTTGAAGCGGAATCCAGGCGTCAACTGCAATGCTCTAGTTGCCGGGAAGACCTACTGTTTATCTGCAGACGATTCTGCGCCTGGCCCGACTGCGAGCCTGAACCCATCTCCCAAAGTTCCAACAACAACTTTGAGAGCAGTTCAGACTATGAGTCCAAAGGCATCGACGGGTACTCCTGCAATAACTCTTGTCTCTCGCTCTGGACCAATTAGATTTATGACTGGAATGGCCCCAGATTGCCTATTCTATCACCCGGTGGCTCCAGGTGATACCTGCCAGAGCATCGTTGATAAGTATAAGTCCTTCACCCTCGACCAGTTCTACGCCTGGAATCCTGCCACTGGTAGGAACTGCGAGTCTCTATGGCTGGGATACTATACCTGTGTTGGTGTCAAGGGCGGACCAAACTCTCCTTCGCAGCAACCTCCCTCGCAGCAACCTCCTTCGCAGCAGCCTCCTTCGCAGCAACCTCCCTCGCAGCAACCTCCCTCGCAGCAACCTCCCTCGCAGCAGCCTCCCTCGCAGCAGCCTCCCTCGCAGCAGCCTCCCTCGCAGCAGTCTAATACGTCCCAACAAACCCAACCAAATGTTAACTCCAAGTGTAACAAGTGGTATCAAGTGGTTCCCGGGGACTACTGTCAGAAAATCGCTGATAAATTCAATATTTCCCTTCAGACCTTCTACGCTTGGAATCCTTCTGTGGGCAGTACCTGTGCCAGCCTCTGGGCAGGGTATAATGTGTGTGTTGGATCTGCCTAA
Protein sequence:
MMVNIQLILGVIILLGTRKAATAALPPHPCAFAATAANGDTCQSLAAERGIGMDQFLKRNPGVNCNALVAGKTYCLSADDSAPGPTASLNPSPKVPTTTLRAVQTMSPKASTGTPAITLVSRSGPIRFMTGMAPDCLFYHPVAPGDTCQSIVDKYKSFTLDQFYAWNPATGRNCESLWLGYYTCVGVKGGPNSPSQQPPSQQPPSQQPPSQQPPSQQPPSQQPPSQQPPSQQPPSQQPPSQQSNTSQQTQPNVNSKCNKWYQVVPGDYCQKIADKFNISLQTFYAWNPSVGSTCASLWAGYNVCVGSA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 32777 | 308 | 8.81 | -0.403 | 69 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779
Pfam: PF01476
SMART: SM00257
KEGG:
PRINTS: