Effector profile
PlantPEAD ID: PlantPEAD23035 Uniprot ID: A0A0G4MCW7 Source: Orthologous
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 100787 Pathogen type: Fungi
Species: Verticillium longisporum Strain: VL1 Other name:
Gene name: NCBI Gene ID: CVQH01007779
Entry name: A0A0G4MCW7_9PEZI Protein name: LysM domain-containing protein
DOI:
Gene/Protein information
Gene sequence:
TTACAAAACACCAACGCAAAGGTAGCTGTCCGCCCACATCAACGTGCAATCGGCCCCAATCCCCGGGTTCCACTTGACGAGGTCCGCCAACGACACCTTGTACCGATTCTGAACCGTCGCGCAAATCTGCCCCTTCTCAACGAAATGAAACGTCTTGCACGTCGCCACCATGCCAGGCTGAATCGGTGCCGGCGTCACGACACCCTCGCCCGGGTTCGTCGGCGTCGGCGTGAACCCGACGACACCGACGCAGGCATAGGCGTCGCGCCGCAGTCCGGCGCAGTTGCTGCCGGCCTGCGGGTTCCACGCGAGGAACGCGGCCACGGGCACGCCGTACCGCGCCGCGACGGTCGAGCAGCGGTCGCCCGAGACGACGAGGTGGAACTTGTTGCAGTTCGGCACGAGCGCCGGCTGCGTTGGCTGCGGCGTCGTGATGCCGTTGCCCGGCGTCGTCGGCGTGTGCCCGATGACGGAGACGCAGGCGTAGGCGTTGGGCTTGAGAGAGGTGCAGCCGGCGCCGACGCTCGGGTTCCAGCTGATAAAGTCGGCGAGGCTGATGCCGGCGCTCTGGGCGACGTCGCGGCACGCGTCAAAGGGCTCGATCATGACGAACGCGTCGCAGTTGTCGGCCATCTTGGGCTGCGTCGGCGACGGCGTGGCGATGCCGTTGTCGGGTTGTGTCGGCGTGTGGCCCCAGGTCGACACGCAGGCGTAGGCGTTTCGCCGGAGGCCCGCGCAGTTGCTGCCGGCTTTCGGGTTCCACTGGAGAAACTTGGCCACGGGAATGTTGTACTTGGCCGAGATGGTCGAGCACCGCTCGCCGGCGACGACAAGGTGAAAGTTGTTGCAGTTGCTGACGAGGTCGGGCTGGGTCGGGGCTGGCGTCTGGAAGTTGGTGCCGGGGTTGGCGGCCGACGGCAGATACCCAATGGTCGAGACGCAGGCGTACGCGTTCGTCTTGAGGCCCTTGCAGCTGCTCAAGGCACCGGGATTCCACTTGAGGAATGCATCGACCGGGATGCCAAACTTGGCAGAAATCGTCGAGCACCTGTCGCCAGAGACGACGAGGTGGAACTGGTTGCAGTTGCTGACGACATCCGGCTGGGCCGGTAGAGGCGTCTGGATGCCGTTGTTCGGGTTCGTCGGCGAGGGCGACCAGCCGATGATGGAGACGCAAGCATACGCATTCGTCTTGAGACCCTTACAGCTGCTCAAGGCAGCCGGATTCCATTCCAGAAACCGATCCACGGGGATGCCGTACTTGGCAGAAATTGTCGAGCACCAATCTCCCGAAACAACGAGATGGAACTGCGCGCAGTTGCTGACCATGTTGGGCTGGACTGGTGACGGGGTCTGGATCCCATTGCCGGCTGCAGTCGTGCTGATGACAGTCACTGTTGACGTGGGCGAGGTGGTCGACGACGTCGAGATCACCCCTGTCCGGGTGGCAGAGAGGGAGAGAACGGGGTCTGCTTGTCGACGTCTGCTGGGTCCAGCGGCTGCCGGCCCGCCGACGCCGAGAAGGGCGACGATGAAAGCAGTGCAGAATCTCAT
Protein sequence:
MRFCTAFIVALLGVGGPAAAGPSRRRQADPVLSLSATRTGVISTSSTTSPTSTVTVISTTAAGNGIQTPSPVQPNMVSNCAQFHLVVSGDWCSTISAKYGIPVDRFLEWNPAALSSCKGLKTNAYACVSIIGWSPSPTNPNNGIQTPLPAQPDVVSNCNQFHLVVSGDRCSTISAKFGIPVDAFLKWNPGALSSCKGLKTNAYACVSTIGYLPSAANPGTNFQTPAPTQPDLVSNCNNFHLVVAGERCSTISAKYNIPVAKFLQWNPKAGSNCAGLRRNAYACVSTWGHTPTQPDNGIATPSPTQPKMADNCDAFVMIEPFDACRDVAQSAGISLADFISWNPSVGAGCTSLKPNAYACVSVIGHTPTTPGNGITTPQPTQPALVPNCNKFHLVVSGDRCSTVAARYGVPVAAFLAWNPQAGSNCAGLRRDAYACVGVVGFTPTPTNPGEGVVTPAPIQPGMVATCKTFHFVEKGQICATVQNRYKVSLADLVKWNPGIGADCTLMWADSYLCVGVL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
53981.5 517 8.66 0.057 36.28
Plant infestation information
Experimental plant:
Susceptible plant: Disease name:
Host classification: NCBI Species:
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.