Effector profile
| PlantPEAD ID: PlantPEAD23055 | Uniprot ID: A0A1X2H9G3 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 13706 | Pathogen type: Fungi |
| Species: Syncephalastrum racemosum | Strain: NRRL 2496 | Other name: Filamentous fungus |
| Gene name: | NCBI Gene ID: MCGN01000006 | |
| Entry name: A0A1X2H9G3_SYNRA | Protein name: LysM domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAAGTTCTCCATCGTCGCTATTGCCGCCCTCGCCATGGCCGCTGCCGTCTCCGCCGCTCCCCTTGAGAAGCGTTGCGGCAAGCACGCCGCCGCTGCCGCTGAGCCCGCTGCTGAGGCCTCCTCCAACTCGGATGCTGCCTCGTACGCTTCCGACTCCTCCTCGGCTGATGCCAAGGCCGCCAAGGTCCCCATTGCCGCTGCCAAGGCTGCTGGCTGGAACCTCTTCTCCCACGTCCCCTCGGACTGCAAGTACGTCCACCTCGTCAGCGACGGTGATGGTTGCGACACCGTTGCCAAGAACGCTGGCATCCCCGAGTCCCAGCTCTACTCCCTGAACCCCGGTCTTCACCACGCCGGTGACCACATGTGCGACAACCTTGACACTGGCAAGGCCTACTGCGTTGGCAAATAA
Protein sequence:
MKFSIVAIAALAMAAAVSAAPLEKRCGKHAAAAAEPAAEASSNSDAASYASDSSSADAKAAKVPIAAAKAAGWNLFSHVPSDCKYVHLVSDGDGCDTVAKNAGIPESQLYSLNPGLHHAGDHMCDNLDTGKAYCVGK
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 13788.5 | 137 | 6.01 | -0.001 | 28.95 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779
Pfam:
SMART:
KEGG:
PRINTS: