Effector profile
| PlantPEAD ID: PlantPEAD23058 | Uniprot ID: M5BVJ6 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1108050 | Pathogen type: Fungi |
| Species: Thanatephorus cucumeris | Strain: AG1-IB / isolate 7/3/14 | Other name: Rhizoctonia solani |
| Gene name: | NCBI Gene ID: CAOJ01006620 | |
| Entry name: M5BVJ6_THACB | Protein name: LysM domain protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGCTATCAATCTCTCACCTCGTATCGGGCTACCGTTTCCTCGAGTTGCGACCTACCGGTAATTGGTGCTCTCAGCTTTTCAACTCGAGCTGGCCGGGAACGAGCACAGACCAAGGCGTCGAAACCTTGCCCACTTCCGTCTTATGCTCGTCCTGCGTCACCCAGAGCCTTCTTATATCCCAGCAATCTGTTATTGGGTATGATCCAGACTTCATTTCGGCCGCCTGGCCGACCATCCAATCCAAATGTGGTATTACGACATCCATCAAGGACCCTGGACAGGCTCATATCAATCTACCCGCTCCGACGGGAACTTCACCAGGCGCTCCAACCAACTGCGGCCGCTGGTACATCGTATCTGCCGGCGAAACCTGTAACACCGTAATCCTCAGCCAGGGGATTACGATGGCCGACTTTCGTGCAGCTAATCCTCAAATCAACAATGATTGCACAAATCTTTGGGCGGATACCGCCTATTGCGTCTATCAAGTCATCAAAGGCCCTGTCCCGTCGTCGTATGCAAACGCACCATCTACCATTGCTCATGGGACCACAACCAACTGTTATCAATACTATACTGCTGTCTCAGGAGACACTTGTACCGCGATATCGTATTCGCAAGTAGCAAGTGTGGAGGATATTTTACGGTGGAACTTGGGGCTCAATGCCCAGTGTACTAACCTTGCTGTCGGTTCTTCGTACTGCGTATGGGGGGATCCCAAAGGGGCGACTACCACTGCAATCACGTCGACCGGCTCAGCGCTTCAAACCGCCACTCTGGCAAATCCTTCCTTGACAGCGTCTTTTTCGTGTACCTACACGTGGTGTGATGGTCCAATCAACACCGCCCCTGTAACAACCACCTCGACGGCGAGCAGCGCGGCACCCACATCAACTGGTGTTCCTCGGCCAGGCAACGCTGCTCCCAACTCGACGACAAGCTGCAAGAAATGGTACACGGTCGTGAGCGGAGACTACTGCTACTTAATTTGTCAAAACCAAGGTTGTACGGTGCCGAATCTACAAACTTGGAATCCTGATCTTGGAGCCAATTGCGTTGCTCAGCTCGGAGTAGCCTATTGTGTGTCTGCTTAA
Protein sequence:
MLSISHLVSGYRFLELRPTGNWCSQLFNSSWPGTSTDQGVETLPTSVLCSSCVTQSLLISQQSVIGYDPDFISAAWPTIQSKCGITTSIKDPGQAHINLPAPTGTSPGAPTNCGRWYIVSAGETCNTVILSQGITMADFRAANPQINNDCTNLWADTAYCVYQVIKGPVPSSYANAPSTIAHGTTTNCYQYYTAVSGDTCTAISYSQVASVEDILRWNLGLNAQCTNLAVGSSYCVWGDPKGATTTAITSTGSALQTATLANPSLTASFSCTYTWCDGPINTAPVTTTSTASSAAPTSTGVPRPGNAAPNSTTSCKKWYTVVSGDYCYLICQNQGCTVPNLQTWNPDLGANCVAQLGVAYCVSA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 38212.7 | 364 | 4.99 | -0.011 | 33.32 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR018392,IPR036779
Pfam: PF01476
SMART: SM00257
KEGG:
PRINTS: