Effector profile
| PlantPEAD ID: PlantPEAD23279 | Uniprot ID: L8WL85 | Source: Orthologous |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 456999 | Pathogen type: Fungi |
| Species: Rhizoctonia solani | Strain: strain AG1-IA | Other name: Thanatephorus cucumeris, Rice sheath blight fungus |
| Gene name: | NCBI Gene ID: AFRT01002593 | |
| Entry name: L8WL85_THACA | Protein name: PBD domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGAGCTTTGACGGTACACATAATAAATATCCGTTAGCGGCCTCTCGAAACGCCCCTCCTATACCCATCAATAACTCGTATGGCGGCGTTGGAGCGGCTCCTGTAGGTAACGGCTCGAGTTTGTCGAGCAATAACATTGTGAAGAGCGGAGAGGTTAGCGTAAAAGAGGAAGGGTTGACCAGCTGGATCTGGACACGGAAATGGATGGTTCTGAAGGAGCAAACGTTGAGTTTCCACAAGAACGAGTCTTCGTCCAGCTCCACTTTAATATGGCTTCGGGATATTGCGAACATTGAACGCACTGATATGAAGCGATATTGTCTCTTCATCGCGACGAAAGACAAGAAATTGTGGCTTAGTTTGAAGAGCGACTCGGAGCTGTACAGTTGGCAGGACGAAATTTATAACCGATCACCTCTTATGGGCGTTAGCAACCCCACAAACTTTGTGCACAAAATTCACGTTGGGTTCGACCCTGTTAGCGGGGCGTTCACGGTATGCACCGTCTTGATCGTGTATCTTGGATGTGAATTCACTCCGACTTGA
Protein sequence:
MSFDGTHNKYPLAASRNAPPIPINNSYGGVGAAPVGNGSSLSSNNIVKSGEVSVKEEGLTSWIWTRKWMVLKEQTLSFHKNESSSSSTLIWLRDIANIERTDMKRYCLFIATKDKKLWLSLKSDSELYSWQDEIYNRSPLMGVSNPTNFVHKIHVGFDPVSGAFTVCTVLIVYLGCEFTPT
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 20169.9 | 181 | 8.4 | -0.224 | 52.26 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR000095,IPR036936,IPR011993,IPR001849
Pfam: PF00786,PF00169
SMART: SM00233
KEGG:
PRINTS: