Effector profile
| PlantPEAD ID: PlantPEAD23505 | Uniprot ID: A0A4R3UBT5 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 304 | Pathogen type: Bacteria |
| Species: Pelomonas saccharophila | Strain: DSM 654 | Other name: Pseudomonas saccharophila |
| Gene name: | NCBI Gene ID: SMBU01000046 | |
| Entry name: A0A4R3UBT5_PELSC | Protein name: GH18 family chitinase | |
| DOI: | ||
Gene/Protein information
Gene sequence:
TCATGGCTGCGCGGCGTTCATCGCGCCCAGGATCTCGCCGTTGTCCTGGCTCAGCTCCCAGGCGAACACGCCGGCCAGGCCGGCACGCCTGGCGAAGGCCAGCTTGGCGCGCACGGCGCGCGGGTCGTCGTAGCCGACGAAGCGCCCCCCGCCGACCATCGCCCAGGACTGGGTGCGCTTGTCGTAATGGGCCTTCATGCCGGCCAGCGCATCGATGTCCTTGAAGGGCACCGAGCCGTCCTCGTTGGGCCAGGGCCTGGCGTAGCTGCCATCGGCCTTCACGCCCTCGAAGCCGCGGCCGTACATGGCCACGCCGGCCACCAGCTTGGCCGCCGGCACGCCCTCGCGCCTGAGGTTGGCCACCGAGGCCTCGAGGCTGGTGTCGTCGCCGGGGCGGGCGCTGCGCAGCGCCGTGTGGTTGGCCGCCTTCTTCGTCCACGGGCCGGCGAAGTCGTAGGTCATCATGAAGACGAGATCGAGTTCCCGGGCCGCGCGCCCCATCGGCATGCGGGCGAGCTGCTCGCGGGTCGTGTTGATGGCGGCCGTCAGCGCGTAGTGCTTGCCCATGTCGCGGCCCAGCGCATCCAGGCCCGCGCGCAGGTCCTGCAGCAACGCGACATAGTTGCCGGCGTCGGCCGGGCTGCCCAGCGCCACGCCGTTGACCGCGCCGTTGGAGCCGGGGTGCTCCCAGTCGATGTCCAGGCCGTCGAAGACCGGATGGGCACGTAGCCAGCCGGTCGCCTGCTTCACGAAGGCGGCGCGGCCCTGCGCGCTGGCGGCGAGGTGGAAGAAGGGGTCGGAGCCGCCCCAGCCGCCCACCGAGGCCAGCAGCTGCACCTGCGGATCGCGCTTCTTCAGGCGTTCGAAGGCGGCCGAGAAGCTGGCCTGGTCGGCATGCGGCGCGATGCCGAAAGCGGGCTGCCCTTGGCAGGCCGCGCCGTCCTGGGCGCGCTGGCCTTCGCCGCAGATCAGCAGGAAGGCGTAGAGCAGATGCGTGAGGCGGCCCGGCTGCAACTGGTCGACCGCATCGGTGCCATGCTCGGCCAGCACATAGGCGCCGACGACGGGCCTGGGTTGAGCCTGGGCCAGCATGGCCGCCAGGGCCAGCGCCGCGATGAACAGCTTCTTCAT
Protein sequence:
MKKLFIAALALAAMLAQAQPRPVVGAYVLAEHGTDAVDQLQPGRLTHLLYAFLLICGEGQRAQDGAACQGQPAFGIAPHADQASFSAAFERLKKRDPQVQLLASVGGWGGSDPFFHLAASAQGRAAFVKQATGWLRAHPVFDGLDIDWEHPGSNGAVNGVALGSPADAGNYVALLQDLRAGLDALGRDMGKHYALTAAINTTREQLARMPMGRAARELDLVFMMTYDFAGPWTKKAANHTALRSARPGDDTSLEASVANLRREGVPAAKLVAGVAMYGRGFEGVKADGSYARPWPNEDGSVPFKDIDALAGMKAHYDKRTQSWAMVGGGRFVGYDDPRAVRAKLAFARRAGLAGVFAWELSQDNGEILGAMNAAQP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 39940.4 | 376 | 8.45 | -0.134 | 34.83 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR011583,IPR029070,IPR001223,IPR001579,IPR017853
Pfam: PF00704
SMART: SM00636
KEGG:
PRINTS: