Effector profile
| PlantPEAD ID: PlantPEAD23580 | Uniprot ID: M5C083 | Source: Orthologous |
| Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 1108050 | Pathogen type: Fungi |
| Species: Thanatephorus cucumeris | Strain: AG1-IB / isolate 7/3/14 | Other name: Rhizoctonia solani |
| Gene name: Chia | NCBI Gene ID: CAOJ01010501 | |
| Entry name: M5C083_THACB | Protein name: GH18 domain-containing protein | |
| DOI: | ||
Gene/Protein information
Gene sequence:
ATGATCTCTGCTAGCCAAATCACCCACCTTAATTTGTACGCAAACTCTCGGACGCTTCACTCTTATATCTCGTTGAAAGTTCTCTACGATATTAGCGTTTTTGCCTTGATTGACGACTCCAACCGTATTGTTCCTGCTACGCCAGGTGATACAGCACTATACCGACAAGCGATGACCCTGAAGGAGAGCAACCCCGATCTCAAAATATTTATAAGCGTTGGAGGATGGGCATTTAACGATCCTGGTCCAAGTCAAAAGCGATTTAGCATCATGGCATCATCTTCGACAAACCGCGCGACGTTCATTTCTTCGAGTTTACAATTCATGAGGACTTACGGATTTGACGGTATCGATATTGACTGGGAGTATCCGGTTGATGACCTTCGAGGGGGCGTTCCTCAGGATAAAGCAAACCTAGTCAGTCTGGTCAAGGAGTTTAGAGCGGCAATCGGTAGCTCTGGGACTCCATATGGCCTCACAATTACTACGCCGTCATCGTACTATTATCTTCGACACTTTGATGTGGCAGAGATTGCGAAGTGGATCGATTGGTTCAACCACATGACCTACGACTTGCACGGAGTATGGGATAAAGATAGCAAATTCCTTGGACCATATATCAATTCGCATAGCAACCTAACGGAAATCGATATCTCTATGAATCTATTCTGGCGGAACAACGTTCCAGCTTCAAAGATCTCCATGGGCCTTGGATTCTATGGTCGATCCTTTCAACTTGCGAATAGCGGATGTACAACTCCCGGCTGTCAGTTTACGGGTCCTGCCAAGGCTGGCGCGTGTACTGGCGCCGCTGGGATTTTATCTTATTCAGAAATCCAGGCTGCCATCGGTGGAAATGCTGTCGGTAAGAAGCGAGCAGCCACGGTTCAATGGGACAAAACCGCTGCTGTCAAGTACGCTTACTGGGGGGACCAATGGATCTCGTACGACGACTCGGATACATTCCAACAGCCCGGCACAAAGAAACTTGATTATGCGAATAAACTGGGACTAACCGCGTTGAATTTCTAA
Protein sequence:
MISASQITHLNLYANSRTLHSYISLKVLYDISVFALIDDSNRIVPATPGDTALYRQAMTLKESNPDLKIFISVGGWAFNDPGPSQKRFSIMASSSTNRATFISSSLQFMRTYGFDGIDIDWEYPVDDLRGGVPQDKANLVSLVKEFRAAIGSSGTPYGLTITTPSSYYYLRHFDVAEIAKWIDWFNHMTYDLHGVWDKDSKFLGPYINSHSNLTEIDISMNLFWRNNVPASKISMGLGFYGRSFQLANSGCTTPGCQFTGPAKAGACTGAAGILSYSEIQAAIGGNAVGKKRAATVQWDKTAAVKYAYWGDQWISYDDSDTFQQPGTKKLDYANKLGLTALNF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 37871.7 | 343 | 7 | -0.2 | 35.18 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: | Disease name: |
| Host classification: | NCBI Species: |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR011583,IPR029070,IPR001223,IPR001579,IPR017853
Pfam: PF00704
SMART: SM00636
KEGG:
PRINTS: